Pairwise Alignments

Query, 434 a.a., NADH dehydrogenase from Klebsiella michiganensis M5al

Subject, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  375 bits (962), Expect = e-108
 Identities = 192/429 (44%), Positives = 275/429 (64%), Gaps = 3/429 (0%)

Query: 6   KKIVIVGGGAGGLELATQLGKKLGRNKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDA 65
           K+IVIVGGGA GL LA++LG+KLG +    + L+D++  H+WKP LHEVA G +D+ ++ 
Sbjct: 4   KRIVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVAVGVIDQSIEG 63

Query: 66  LSYLAHARNHDFQFQLGSVVDINRETKTITLAELHNEKGELLVPERKLPYDTLVMALGST 125
           L Y  H   + +++  G +   + +TKTI LA ++++ GELL+  R++ YD LV+ALG  
Sbjct: 64  LLYRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALGGV 123

Query: 126 SNDFNTPGVKENCIFLDNPHQARRFHQEMLDLFLKYSANLGANGKVNIAIVGGGATGVEL 185
           SN FNT G +++CIFLD+   A  FHQ++LD  L+ +       KV+I IVG GATGVEL
Sbjct: 124 SNSFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQLNET---QEKVSIGIVGAGATGVEL 180

Query: 186 SAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISGAAHSELTKLGVRVLT 245
           +AELH+ ++ +  YGY  ++   L+V L+EA  +ILP LP R+S  A + L K+G+R+  
Sbjct: 181 AAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIGIRLHI 240

Query: 246 KTMVTSADANGLHTKEGEFIHADLMVWAAGIKAPDFMKEIGGLETNRINQLVVEPTLQTT 305
              V     +G  T++G+ I A L VWAAG+K P   +    L     NQ+ V+  ++  
Sbjct: 241 GVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDACMRVK 300

Query: 306 RDADIYAIGDCASCARPEGGFVPPRAQAAHQMATCALYNIVAQMKGKPLKAYTYKDHGSL 365
              DIYAIGDCA      G  VPPRAQAA QMA     NIV +++GK  K + YKD+GSL
Sbjct: 301 GQQDIYAIGDCALLILDSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEKPFVYKDYGSL 360

Query: 366 VSLSNYSTVGSLMGNLMRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGRINR 425
           VSLS +S VG+LMGNL  G+  +EG IAR +YISLY+ H  +L+G+F   +  +  ++ +
Sbjct: 361 VSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAIIYRIAQKLLK 420

Query: 426 IIRPRLKLH 434
             RP+LKLH
Sbjct: 421 WQRPKLKLH 429