Pairwise Alignments

Query, 542 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

Subject, 532 a.a., oligopeptide uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  323 bits (828), Expect = 1e-92
 Identities = 193/542 (35%), Positives = 293/542 (54%), Gaps = 23/542 (4%)

Query: 1   MKSQKYNHITRVLLAVGLFSMAIPALAAQVPPGTVLAEKQELVRNNGSEPSSLDPHKVES 60
           M S K N     L+   L   A PALA  V           L R N  EP +LD      
Sbjct: 1   MASLKLNLRAAALIG-SLLIGASPALAEAV-----------LHRGNAGEPQTLDQAHTSI 48

Query: 61  DVENNIISDLFEGLVSVSPAGEIQPRLAEKWE-NKDNTVWTFHLRPGVTWSDGTAITAQD 119
           ++E  I+ DL+EGL     AG+I P  AE WE + D TV+TF LR    WSDG+ +TA+D
Sbjct: 49  NIEEFILKDLYEGLTIYDAAGKIVPGAAETWELSDDGTVYTFKLRADAKWSDGSPVTAED 108

Query: 120 IVWSWQRLVSPLTASPYAS--YPGNMHIVNGAEIAQGQKAPETLGVKALDDTTLEVTLTQ 177
             +S++R+  P TA+ YA+  +P    I N  ++ +G+   + LGVKA+D+ TLEVTL +
Sbjct: 109 FAFSFRRVEDPKTAAEYANILFP----IKNAEKVNKGEVPVDQLGVKAVDEKTLEVTLER 164

Query: 178 PNAAFLAMLAHPSLVPLDKVLISRYGDKWTKPEHMVTSGPYKLSQWVVNERIVAERNPRY 237
           P   FL +LAH + +P+ K  + + G  + KP  MV++G +KL+  V N+ +  E+N  Y
Sbjct: 165 PTPFFLELLAHQTALPVSKASVEKNGADFVKPGVMVSNGAFKLTAHVPNDSLTVEKNTNY 224

Query: 238 WDNAHTVINKVTYLPISSETADVNRYKAGEIDIVYTVPINQFAQLKKTMGDQLDVSPQLA 297
           WD A+  ++KV + PI  + A V R++A E+D+ Y    +Q  +L+ + G+Q+ VSP LA
Sbjct: 225 WDAANVKLDKVIFYPIDDQAASVRRFEAKEMDLAYNFSADQIERLRTSYGEQVHVSPTLA 284

Query: 298 TYYYEFNTTRPPFNDPRVRRALNMALDKDIIAEKVMGQGQRPAWLISQPDIGGV-KLHNP 356
           TYYY F+T + P+ND RVRRAL+MA+D+D +A+++    Q P++ +  P I         
Sbjct: 285 TYYYAFDTRQEPYNDVRVRRALSMAVDRDFLAKEIYSGSQLPSYSMVPPGIESYGDPAKA 344

Query: 357 EYASWPRDKRIAEAKKLLSEAGYNE-SHPLVFNLLYNTSESHQRIAIAASSMWKKNLGVE 415
           ++A   +  R  +A +L+ EAGY E   PL   + YNT+ +H+R+A A + MWK   G +
Sbjct: 345 DFADMSQLDREDKAIELMKEAGYGEGGKPLNIEIRYNTNPNHERVATAVADMWKNTFGAK 404

Query: 416 AKLQNQEWKTMLDAMHT-HNFDAVRYAWIADYDDAATFLN-NFRTGDSENTSQYSNPAYD 473
             L N +  +    +     F+  R  W+ADY DA  FL  +  T  + N   + N  +D
Sbjct: 405 VSLVNLDVSSHYAYLQEGGKFNVARAGWVADYADAENFLALSLSTNKTFNYGHFENAEFD 464

Query: 474 EALHNAAKAADTTARGKFYQQAEDLLGQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYY 533
             +  + +  D  AR K   +AE LL ++ P  P        LV   V G+  +    + 
Sbjct: 465 ALMKKSYEEQDPAARSKIMHEAETLLMKEQPIAPFLTQADLWLVSERVKGWQDNAPNAHL 524

Query: 534 SK 535
           SK
Sbjct: 525 SK 526