Pairwise Alignments

Query, 715 a.a., ABC transporter from Klebsiella michiganensis M5al

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  259 bits (663), Expect = 2e-73
 Identities = 163/578 (28%), Positives = 291/578 (50%), Gaps = 15/578 (2%)

Query: 122 PEIEKTIAFRPAAPERDIRTESYLARFQPDWLRKIVLKDIRPYMHVMLASFAINVLALSG 181
           PE+  +        ++ +  +   +RF   W     L+  R    ++L SF + +LAL  
Sbjct: 119 PEVISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALIS 178

Query: 182 ILFSMQVYDRVIPAQSYPTLYVLFSGVLLAAVFAFVLKIMR----GHVTDLLGKRGDIRV 237
            LF   V D+V+  Q++ TL VL  G+++  V   VL+ +R     H  + +  +  +++
Sbjct: 179 PLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKL 238

Query: 238 SDRVFGHALRLKNSAVPRSTGSFISQIRELEQVREMMTSTMMTIVADLPFFLLFQVVLFI 297
              +FG  L    S   R  G+ ++++REL+ +RE +T +M T+  +L F  +F  V+ +
Sbjct: 239 VQHLFGLPLMFFKS---RQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSL 295

Query: 298 VSPWLSWIAPVATVLMILPGLLLQRKLAALANKNQHENTLRNAILVESIQGLQDIKMMQA 357
           +S  L+ +        +L    L  ++ A   K         + L E++ G + +K +  
Sbjct: 296 LSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAV 355

Query: 358 ESRFLHQWNSYIAITAESGVKTRRLTHGLVSWGMSVQNLLYATVVVVGAPLVINGDITTG 417
           E RF+ +W+        +G   ++L +        +Q +    ++ +GA  V++ ++T G
Sbjct: 356 EPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIG 415

Query: 418 AMVAASMLSTRMVAPMTALCGVLARWQQVKTAKASLDTLMALPVEGGQDEPRVHRAVLHG 477
            ++A +M++  +  P+  +  +  ++ Q + A   L  ++ LPVE       V    + G
Sbjct: 416 QLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNV---TISG 472

Query: 478 NYEFRQAEFRYGLNDAAIPLRINQLS--IKAGERIAVLGRIGAGKSTLLQAMMGNIELVS 535
              F+   FRY      IP  IN LS  I+AGE + V+G  G+GKSTL + ++       
Sbjct: 473 AISFKNILFRY---QPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQ 529

Query: 536 GELRLDDLSLPQIDLADIRRNATLLTQEARLFHGTLRENLILGRPAATDDEIFSVLTLCG 595
           G + +D + L  I++  +R+   ++ QE  LFH ++ EN+   +P A+ +EI     L G
Sbjct: 530 GSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSG 589

Query: 596 ALEFVRKLPLGLEHVVMEGGLGLSGGQRQSLLLARTLLRDPNIILLDEPTSFFDERTEKA 655
           A +F+ KLP+G + V+ EGG  LSGGQRQ L +ARTLL DP +++LDE TS  D+ ++  
Sbjct: 590 AHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAV 649

Query: 656 FVEQLAQWAGERTMIIATHKAAVLNIVDRILVIQDGQL 693
               +A  A  RT+I   H+ + +   DRI+V+  G +
Sbjct: 650 IQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTI 687