Pairwise Alignments

Query, 711 a.a., membrane protein from Klebsiella michiganensis M5al

Subject, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

 Score =  561 bits (1446), Expect = e-164
 Identities = 311/715 (43%), Positives = 430/715 (60%), Gaps = 17/715 (2%)

Query: 6   LRRYTRNSAWLYNIRIFIALCGTTAFPWWLGEVKLTIPLTLGVVAAALTDLDDRLTGRLR 65
           LR Y  N    Y++ I + L G     W+        PL LGV+AAAL D DDR +GRL+
Sbjct: 11  LRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLK 70

Query: 66  NLAITLVCFFIASASVELLFPWPWLFAAGLTVSTIGFILLGGLGQRYATIAFGALLIAIY 125
           ++ +TL+CF IA+ S+E+LF  PWLFA GL  S+ GFI+LG +G RYA+IAF +LL+A+Y
Sbjct: 71  SIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVY 130

Query: 126 TMLGVTLYSHWYLQPLFLLAGAVWYNLLTLAGHLIFPIRPLQDNLARSYEQLAHYLELKS 185
           TMLG    ++ + QPL LL+G+ WY L+++  H  +P++P+Q NLA  + QLA+YLE KS
Sbjct: 131 TMLGAHQSTNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKS 190

Query: 186 RLFDPDIEDESQAPLYDLAIANGQLVATLNQTKVSLLTRLRGDRGQRGTRRTLQYYFVAQ 245
            LF P      Q      A  N   V  LNQ K   LTR +       + R L  YF+AQ
Sbjct: 191 TLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQ 250

Query: 246 DIHERASSSHIQYQTLRDRFRYSDVMFRFQRMLSMQAQACQKLSRAILLREPYLHDTHFE 305
           DIHER SSSH +YQ L D F  SD++FRF+ +L  QA+AC+ ++++I L   Y HD+   
Sbjct: 251 DIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASI 310

Query: 306 RAFMHLDAALDRVKASGAP--AEQIKALGFLLNNLRAIDAQLATIESVQTTAQFSNNTEN 363
            A   L  +L  ++          +  LG+L NNL  ++ QL  + +       +   E 
Sbjct: 311 VALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPDV----AKPEEG 366

Query: 364 LLADDQPGGFGDVWLRLRSNMSPESALFRHAVRMSLVLCAGYAFIQLTGLNHGYWILLTS 423
           +L D +    G +W R+R+N++ +S LFRHA+R+S+ L  GYA IQ  G+  GYWILLT+
Sbjct: 367 VLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTT 426

Query: 424 LFVCQPNYNATRHRLALRIIGTLIGVAIGLPVLLLVPSVEGQLFLIVLTGVLFFAFRNVQ 483
           LFVCQPNY AT+ +L  RIIGTL G+ IG+P+L   PS E QL  IV +GV+FFAFR   
Sbjct: 427 LFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNN 486

Query: 484 YAHATMFITLLVLLCFNLLGEGFEVALPRIFDTLIGCAIAWAAVSFIWPDWKFRNLPRVL 543
           Y +AT FITLLVL CFN LGEG+ V LPR+ DTLIGCA+A AAV  I PDW+ + L +V+
Sbjct: 487 YGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVM 546

Query: 544 EQAINANCRYLDAILEQYHQGRDNRLAYRIARRAAHNRDGELASVVSNLSTEPRAGSQIR 603
            +AI+AN +YL  I+ QY  G+ + L+YRIARR AHN+D  L++ V+N+  EP       
Sbjct: 547 AEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAA 606

Query: 604 ETAFRLLCLNHTFTSYISALGAHREKLTTPDILALLDDAVCYVDDAL---------HHSP 654
           + +FR L LNH   SYISALGAHR +L    +  L+ D+   +   L         H   
Sbjct: 607 DESFRFLTLNHALLSYISALGAHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHCEE 666

Query: 655 ADEQRVQQALANLQTRIQHLDPRAESKEPLVLQQIGLLLALLPEICRLQRQVEIQ 709
            D   +    + L+ R+       E    +VLQQ+ L+  +LPE+  L  +  ++
Sbjct: 667 CDTSGIDS--SGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLASKFAVK 719