Pairwise Alignments

Query, 597 a.a., L,D-transpeptidase from Klebsiella michiganensis M5al

Subject, 571 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  203 bits (516), Expect = 2e-56
 Identities = 135/434 (31%), Positives = 223/434 (51%), Gaps = 27/434 (6%)

Query: 154 DVVLSDAMMGY-LHFISGIPTQ---GNRWLYGTKPYAMSTPPLSVINQWQVALDNGSLPQ 209
           +V+LSD ++ Y +H ++G       G  W Y        T     + Q +  +   ++ +
Sbjct: 131 EVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDEAHLDFDT----TLKQLEEHIKAHTVAE 186

Query: 210 FIAGLAPQHPQYAAMHQALL--AQVADSRPWPQLTSKTSLRPGEWSNDAGALREILQRTG 267
            I GLAP+   Y  + Q L     +A   P+  +     ++PG  S     +   L+  G
Sbjct: 187 AINGLAPKITPYHQLKQYLAHYKDLAARYPFTTIPYTEVIKPGTTSPSIKGIAARLKEQG 246

Query: 268 MLDESAKIALPGDEVVSPSAGKKAKNSGRGVYDRQLVEGVKRFQAWQGLGADGVIGQATR 327
            LD +A +    D  +  +A          +YD  L   +++FQA   L ADGVIG  T 
Sbjct: 247 YLDANATVQ---DATLVANAPL--------LYDNILEAAIRQFQADHSLKADGVIGAGTM 295

Query: 328 DWLNVSPAQRAGVLALNIQRLRLLPGNLATG-IMVNIPAFSLVYYQDGSQVLASRVIVGR 386
             LNV  AQR   + +N++R R L  NL+   ++VN+  + L+ ++D +    + +I+G+
Sbjct: 296 AALNVPYAQRVEQIRINLERARWLSANLSANYLIVNLAGYELLLFKDNNLSWRTDIIIGK 355

Query: 387 PDRKTPMMSSALNNVVVNPPWNVPPTLARNDILPKVRNNPGYLEQHGYTMMRGWNSKETI 446
            D KTP+  S L  VVVNP W VP +++  +I+   R +P YL +  + ++   +S   +
Sbjct: 356 IDSKTPLFKSKLKYVVVNPTWTVPNSIS-TEIINHQRKDPDYLHKKHFKVVE--SSGTPV 412

Query: 447 DPYQVDWETITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDGRAL 506
           D   +DW ++T  N P+ F Q PGA NSLG  KF  P+  +IYLHDTP+ NLF +  RA 
Sbjct: 413 DASGIDWHSMTRKNFPYWFVQEPGADNSLGLVKFIFPNQYSIYLHDTPSKNLFDKTDRAF 472

Query: 507 SSGCVRVNKASELANMLLQ-DAGWNDARISDALKQGNTRYVNIRQNIPVNLYYLTAFVGA 565
           S GC+RV     LA+ LL  +A W+   +++ L +G T  + + + + + + Y TA +  
Sbjct: 473 SHGCIRVKDPLVLADKLLSANANWSSETLNNKLAEGKTENLFLDEPLDILIMYWTATI-K 531

Query: 566 DGRTQYRTDIYNYD 579
           +G+ ++  D+Y  D
Sbjct: 532 NGKIKFYNDVYTRD 545