Pairwise Alignments

Query, 582 a.a., lipid ABC transporter permease/ATP-binding protein from Klebsiella michiganensis M5al

Subject, 604 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella loihica PV-4

 Score =  601 bits (1550), Expect = e-176
 Identities = 308/604 (50%), Positives = 429/604 (71%), Gaps = 22/604 (3%)

Query: 1   MQNDKDLSTWQTFRRLWPIIAPFKPGLIVAAVALVLNAASDTFMLSLLKPLLDDGFGK-- 58
           M N         F RL   + P K  L ++   LVL    D   +  +KP +D GF    
Sbjct: 1   MTNSSKSEVGSVFLRLLTYLVPLKGVLFLSVFGLVLYGLVDATFIYSIKPFIDQGFASNV 60

Query: 59  -------------------TDRSVLIWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMT 99
                              +D  VL   P VVIGL  LRG+ +++S+Y IS++S +++M 
Sbjct: 61  PTTPGLVEGVDLGMGGGFNSDSDVLKTAPFVVIGLFTLRGLANFLSTYGISYISARMIMD 120

Query: 100 MRRRLFSHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVM 159
           MR+++F H + +PV++ D +S+G L+SR+T+D+EQ+A +S SALIT+VR+G ++IG+  +
Sbjct: 121 MRQQVFEHYLRLPVSYIDAESSGNLISRVTFDTEQIARASGSALITIVRDGITVIGMLGV 180

Query: 160 MFYYSWQLSVILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLM 219
           MFY SW+LS+ ++++ P++ + I VVS++FR +SK +Q  MG VT+  EQM+KGHK VL+
Sbjct: 181 MFYNSWKLSLCILIVGPLIGLVIAVVSRKFRKVSKQIQTAMGGVTSVTEQMIKGHKNVLV 240

Query: 220 FGGQAVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETL 279
           FGGQ  E++RF KV++  R + MK+  A +IS P++ +I SLALAFVLYA+S  S+   L
Sbjct: 241 FGGQQAESQRFAKVNDDNRSRTMKLALAQAISQPLVMVIGSLALAFVLYASSLESMRADL 300

Query: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGTRVIERAK 339
           TAGT   + ++M+A+++P+KSLT VNA+FQRG+AAC T+FA+LD+  E D GT   +R +
Sbjct: 301 TAGTFATILAAMLAMLQPIKSLTRVNAEFQRGIAACSTIFAVLDTPAEVDNGTFETKRVE 360

Query: 340 GNLEFKNVTFRYPGREVAALRNIDLNIPEGKTVALVGRSGSGKSTIASLITRFY-DVDDG 398
           G L F  V FRY  +E  AL+ +D  +  G+T+ALVGRSGSGKSTIASLITRFY D+D G
Sbjct: 361 GRLSFDKVNFRYNNQEGLALKEVDFQVNPGETLALVGRSGSGKSTIASLITRFYSDLDSG 420

Query: 399 QILLDGHDLREYTLSSLRDQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAY 458
            I LD   LR+Y L++LR QVALVSQ V L NDT+A NIAYA   E + EQI +AA++A 
Sbjct: 421 DIRLDDVSLRDYKLAALRRQVALVSQQVTLINDTIAANIAYAYPGEVTEEQIIDAAKLAN 480

Query: 459 AMDFINKMDNGLDTIIGENGVMLSGGQRQRIAIARALLRNSPILILDEATSALDTESERA 518
           A +FI  M  G+ T +GENGVMLSGGQRQRIAIARA+LR++PILILDEATSALDTESE+A
Sbjct: 481 AWEFICNMPEGIYTQVGENGVMLSGGQRQRIAIARAILRDAPILILDEATSALDTESEKA 540

Query: 519 IQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGQIVERGSHTDLLEHKGVYAQLHKM 578
           IQ  LD L++NRTS+VIAHRLST+E A++I+VV+ G++VERG+H++LL  +G+Y  L++M
Sbjct: 541 IQTGLDNLRQNRTSIVIAHRLSTVENANQILVVDQGKVVERGTHSELLAKQGIYYNLYQM 600

Query: 579 QFGA 582
           QFG+
Sbjct: 601 QFGS 604