Pairwise Alignments

Query, 875 a.a., phage tail tape measure protein from Klebsiella michiganensis M5al

Subject, 874 a.a., tail protein from Herbaspirillum seropedicae SmR1

 Score =  209 bits (531), Expect = 8e-58
 Identities = 228/923 (24%), Positives = 373/923 (40%), Gaps = 114/923 (12%)

Query: 6   LRLQVVLNAVDKLTRPLKVAQAGSKELASAVRQTREQLKRLNDAGGQLKSFDQLSQSLSR 65
           L++QVV + ++K+T PLK    G+++   A++ T ++L+ LN     L     L QS+ +
Sbjct: 5   LKMQVVFSMMEKITAPLKKIAGGARDTGKALKDTSDRLRELNKQQSDLNGLRDLHQSMRK 64

Query: 66  TSNELDQARLRAQMMTREMSALESPTKKQTAALETQWRAVSRLEQKQQQETRQMAAARAE 125
           TS EL  A+ R   +   M A E+PT+  T       R+V  L+   +++  Q  A R  
Sbjct: 65  TSAELATAQQRVSELAARMKAAENPTRAMTREFNAAVRSVKSLQDASEKQGAQYRALRER 124

Query: 126 LYRLGISAGGGARETARITRETDRYNKQLAEQERRLRDVGERQRKLNTVRAKADKMRDVR 185
           L   GI +   A     +       N +LA+Q+++L     +Q+ +   R +ADK+R   
Sbjct: 125 LADAGIGSRQLANAQTWLKNSIAATNAELADQQKKLAASNRQQQVMANARQRADKLRSTA 184

Query: 186 NSLAGNGAGMMAAGVTTGATLLAPIRAYSESENAANQLAGSMMGPGGKVAAEFLQLNKLA 245
             LA  G G  AAG   GA  LA +R     E    ++    +GP     AE ++  +  
Sbjct: 185 GGLAAAGVGATAAGAAMGAPALAGLREAKHYETENGRVRALGLGPAA--TAEAIKFARQM 242

Query: 246 IALGDRLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTDAAEFAAKL 305
              G      T+   N+   L R G++A       G++     V   MA       A   
Sbjct: 243 KTYG------TSQLDNLQ--LLRDGITA------FGDTHHAEMVAPMMAKMKFGNHAFYG 288

Query: 306 QDATQTTEKDMMSLMDVIQR-------GYYAGVDPGNMLQ-------GFANISSAMEIIK 351
           +      E+  M ++ VI+        G ++     NM+Q       G       + +IK
Sbjct: 289 EAEGAENERKFMDMLKVIEMRNGTKDIGTFS--KQANMVQQVLTATGGRVGPGEWLNLIK 346

Query: 352 QRGLDAAKTFSPLLVMADQAGMAGESAGN--------AYRKIFQATLDAKKIKSVND--- 400
             G+ AAK             +  E  GN        AY+ ++Q     + I  + D   
Sbjct: 347 TGGI-AAKGIKDEAFYYQMESLVQEMGGNRVGTSMMSAYQNLYQGRTTKRSIGMLADLGL 405

Query: 401 ----------------ELKGKGIKFDFSDGKGGFGGLEK-MYAQLDKLEKLNPETKLATM 443
                            L    IK      +  F  +EK +  QL      + +  L  +
Sbjct: 406 IGDTSKVRHDKAGQVSYLNPGAIKGADLFRENQFEWMEKVLLPQLASKGITDEKGILDAI 465

Query: 444 KALFGNDNEVLKALSIMTTKGIEGYRETVAKLENQATLRERVEASLNTLGNKWEAAGGSF 503
             +F N     +  S M  +  + ++         A + E  +   +T   K        
Sbjct: 466 GGIFSN-RTAAQLFSTMYQQRAQIHKNEKLN-RGAANIDELDKLGRDTASGKELETLSKV 523

Query: 504 TNAMASIGETVAPVLKNIADWLGNLASALDSFVKRHPQLTAALFKIAAVFAVVATAAGVL 563
            +    +G  + P+     +   N   AL  F++R+P    A+    +  A +    G L
Sbjct: 524 ADLKLELGSKILPLYAAGLEMATNAVQALTGFMERNPATAKAMIVGFSAIAGIMVVMGPL 583

Query: 564 SLALASILGPMAVVRVSAGVLGIKFASAFGLIKQVIGGAGQAILWLGRLMMANPILAIIG 623
            LALAS++GP A++ V    +G++      L+  ++ G G   +WLGR+ + NPI   + 
Sbjct: 584 MLALASVIGPYAMLHVLFAKIGLQG----NLLMPILRGIGTVFMWLGRVFLMNPIGLAVT 639

Query: 624 LIAMGAIYIWQNWETLGPKFKAMWD----AISSGVSRVWA-VIKQTISSKWDEILSDVAA 678
            IA  A  +++NWE +   F  +W     A + G+  V A +I  +    + +  + V +
Sbjct: 640 AIAGAAYLLYRNWEPIAGFFGNLWQQVRAAFAGGLGGVAALIINWSPLGIFYQAFAGVLS 699

Query: 679 -----LPAKFKAVGGAIIDGILSGINEKWETLKSKLASVKSYLPDWMTGGDKSPGAPQQK 733
                LPAKF   G  I+ G+ SGI      +K  +    S +  W         +P + 
Sbjct: 700 WFGIELPAKFSDFGAMILQGLASGITRALGAVKDAVLGAGSSVIGWFKE-KLDIHSPSRV 758

Query: 734 GAGGFFAGMYDSGGYIPRG-QVGI-AGENGPELINGPAYVTSRRRTAALASVVAGMMGGA 791
            A        + G Y  +G  VG+  G++GP                   S V+G+ G  
Sbjct: 759 FA--------ELGDYTMQGLAVGLNRGQDGP------------------LSAVSGLAGKL 792

Query: 792 TPAEAA-PLHPMSLPAASYRPAAEKPP----GTRPVFQFETQAQIIIQALPGQSPQDIAR 846
             A AA  +   S+PA ++     +PP     T+PV       QIIIQ LPG   Q IAR
Sbjct: 793 ASAGAAVAIGAGSMPAMAFD---SRPPLSAASTQPVVHQGDTVQIIIQPLPGMDEQAIAR 849

Query: 847 EVARQLDERERRMRAKARSNFSD 869
            VA +LD R+R   ++ RSN +D
Sbjct: 850 AVAVELDRRDRMKASRQRSNLAD 872