Pairwise Alignments

Query, 322 a.a., DNA-binding protein YbiB from Klebsiella michiganensis M5al

Subject, 322 a.a., DNA-binding protein YbiB from Pantoea sp. MT58

 Score =  396 bits (1018), Expect = e-115
 Identities = 206/321 (64%), Positives = 245/321 (76%), Gaps = 5/321 (1%)

Query: 1   MDYSKIIKEVGRGKNHARDLDVETARALYSRMLNGEVPELELGGILIALRIKGEGEAEMK 60
           M+ +KIIKE+GRGKNHARD+D +TA ALY  ML GEVP+LELGGILIALRIKGEGE EM+
Sbjct: 1   MELNKIIKEIGRGKNHARDIDFDTAVALYGAMLAGEVPDLELGGILIALRIKGEGEDEMR 60

Query: 61  GFYEAMQNHTMKLTPPIAKPMPIVIPSYNGARKQANLTPLLAVLLHKLGFPVIVHGVSHD 120
           GFY+AMQ   M+L  P  +PMPIVIPSYNGAR+Q NLTPLLA+LL KLGFPV+VHGVS D
Sbjct: 61  GFYQAMQAQMMQLRAPENRPMPIVIPSYNGARRQGNLTPLLALLLVKLGFPVVVHGVSDD 120

Query: 121 PTRVLTETIFELMGIPATLQAGQAQARLDSHQPVYVPVGALCPPLEKQLAMRWRMGVRNS 180
            TR+ +E +F  +G+     A  AQARLD  + V++ +  LCPP+ KQL++RWRMGVRNS
Sbjct: 121 ATRITSEAVFAALGVTPVTTAEAAQARLDQGELVFITIDHLCPPMAKQLSLRWRMGVRNS 180

Query: 181 AHTLAKLATPFAEDAALRLSSVSHPEYVGRVAKFFAEIGGRALLMHGTEGEVYANPQRCP 240
           AHTLAKLATPFAE AALRLSSVSHPEYV RVAKFF++I   A+L++GTEGEVYANPQRCP
Sbjct: 181 AHTLAKLATPFAERAALRLSSVSHPEYVPRVAKFFSDIDAPAILLNGTEGEVYANPQRCP 240

Query: 241 QISLIDAAG--TRVVNERQDGAAEQALVLPASKDPEVTARWIEHCSVGSEPLPQSLKIQL 298
            IS+I  AG    V  ERQ    E A+ LPA K  EVTARWI+       P+P SL++QL
Sbjct: 241 AISMIQGAGVEAEVWVERQ---PEVAVELPADKTAEVTARWIDEVLNQQRPVPASLRLQL 297

Query: 299 ACCLVATGVVASLEQGLAKVA 319
           ACCL A+G   SL     ++A
Sbjct: 298 ACCLRASGQCDSLAAAGQQIA 318