Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 696 a.a., Excinuclease ABC subunit B from Acidovorax sp. GW101-3H11

 Score =  858 bits (2218), Expect = 0.0
 Identities = 426/662 (64%), Positives = 533/662 (80%), Gaps = 1/662 (0%)

Query: 4   PFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVL 63
           PF+L   + P+GDQPEAI +L EGL DG   QTLLGVTGSGKTFT+ANVIA + RP ++ 
Sbjct: 23  PFELFQPYPPAGDQPEAIAKLVEGLNDGETFQTLLGVTGSGKTFTMANVIARMGRPAIIF 82

Query: 64  APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMR 123
           APNKTLAAQLY E +EFFP+NAVEYFVSYYDYYQPEAYVP  D FIEKD+++NEHIEQMR
Sbjct: 83  APNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMR 142

Query: 124 LSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYTR 183
           LS TK+L+ER+DVV+VA+VSAIYG+G+P+ Y +M++ L VG  + QR ++ +L  +QY R
Sbjct: 143 LSCTKSLMERKDVVIVATVSAIYGIGEPESYHRMVMTLRVGDKLGQRDVIAQLIRMQYQR 202

Query: 184 NDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPRFTV 243
           N+  F RG FRVRG+ ID+FPAE  ++A+R+ELFD+EVE L LFDPLTG ++  IPRFTV
Sbjct: 203 NEADFSRGKFRVRGDTIDVFPAEHSELAIRIELFDDEVESLQLFDPLTGRVKQKIPRFTV 262

Query: 244 YPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELGYC 303
           YP +HYVTPR++++ A+E IK+ELAER + L+ + KL+E QRL QRT+FDLEM++E+G+C
Sbjct: 263 YPSSHYVTPRDKVLAAVETIKIELAERLQQLVADGKLVEAQRLEQRTRFDLEMLSEVGHC 322

Query: 304 SGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETLVE 363
            GIENY+++LSG  PG+PP TL DY+P D L+ +DESH  I Q+  MY GDRARK TLVE
Sbjct: 323 KGIENYTQHLSGAAPGDPPSTLTDYMPRDALMFLDESHQMIGQLSAMYNGDRARKTTLVE 382

Query: 364 YGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDPII 423
           YGFRLPSALDNRP+KFEEFE    Q I+V+ATP  YE   SG ++VDQVVRPTGL+DPI+
Sbjct: 383 YGFRLPSALDNRPLKFEEFEQRMRQVIFVTATPADYERTHSG-QIVDQVVRPTGLVDPIV 441

Query: 424 EVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTV 483
           EVRP   QVDD+L EIR+R    ERVL+TTLTKRMAE LT+YL ++G +VRYLHSD+DTV
Sbjct: 442 EVRPATHQVDDVLQEIRIRVEKEERVLITTLTKRMAEQLTDYLTDNGVKVRYLHSDVDTV 501

Query: 484 ERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           ER+EIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAA
Sbjct: 502 ERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA 561

Query: 544 RNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQNI 603
           RN+NGKAILY D+IT SM KA+GETERRR KQ A+NEEHGI P+ + K+V D++    + 
Sbjct: 562 RNLNGKAILYADRITESMKKAMGETERRRIKQIAHNEEHGITPRSIVKRVRDLIDGVYSE 621

Query: 604 AKTKTKGRGKSRSPVEADTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQL 663
              K   R +  +   A    ++ K + ++I  LE  M++HA+NLEFE+AA++RDQL +L
Sbjct: 622 KAGKDAERLEQEALQRAKVEDMSEKDVAREIKRLEKLMLEHARNLEFEQAARVRDQLTRL 681

Query: 664 RE 665
           ++
Sbjct: 682 KD 683