Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 675 a.a., excinuclease ABC subunit UvrB from Parabacteroides merdae CL09T00C40

 Score =  740 bits (1911), Expect = 0.0
 Identities = 383/669 (57%), Positives = 483/669 (72%), Gaps = 5/669 (0%)

Query: 5   FKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLA 64
           F+L S F P+GDQPEAI  L +G++ G+  QTLLGVTGSGKTFTIANVI ++++PT++L+
Sbjct: 3   FELSSPFSPTGDQPEAIAALSDGIKSGVPFQTLLGVTGSGKTFTIANVIKEVRKPTLILS 62

Query: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
            NKTLAAQLY E K FFP NAVEYFVSYYDYYQPEAY+P++DT+IEKD  +N+ I+++RL
Sbjct: 63  HNKTLAAQLYSEFKAFFPNNAVEYFVSYYDYYQPEAYLPTTDTYIEKDLQINDEIDKLRL 122

Query: 125 SATKALLE-RRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYTR 183
            AT +LL  R+DV+VV+SVS +YG+ DP  + + ++HL  GM ID+  +LRR  +  Y  
Sbjct: 123 RATASLLSGRKDVIVVSSVSCLYGMADPTAFAEKVVHLEKGMRIDRDKLLRRFVDALYVN 182

Query: 184 NDQAFQRGTFRVRGEVIDIFPAES--DDVALRVELFDEEVERLSLFDPLTGHIESTIPRF 241
           N   F RG FRV G+ +DIFPA    D  A R+E +D+EV+R+S FDP TG         
Sbjct: 183 NKIEFNRGCFRVNGDTVDIFPAIETFDGAAYRIEFWDDEVDRISSFDPQTGQEIDEQDEL 242

Query: 242 TVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELG 301
            +YP   +VT +ERI  A+ +I V+L  +   L E  K  E +RL +R  FDLEM+ ELG
Sbjct: 243 NIYPTNLFVTTQERINTAIGQIDVDLGTQVNFLREIGKPYEAKRLYERVTFDLEMIRELG 302

Query: 302 YCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETL 361
           +CSGIENYSRY  GR  GE P  L DY P D LLV+DESHVTIPQI  MY GD +RK+ L
Sbjct: 303 HCSGIENYSRYFDGRQAGERPFCLLDYFPKDFLLVVDESHVTIPQIRAMYGGDYSRKKNL 362

Query: 362 VEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDP 421
           V+YGFRLP+A+DNRP+ F+EFE+L P  IYVSATP  YEL+KS   VVDQV+RPTGLLDP
Sbjct: 363 VDYGFRLPAAMDNRPLTFDEFESLTPLAIYVSATPADYELEKSEGIVVDQVIRPTGLLDP 422

Query: 422 IIEVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDID 481
           +IEVRP   Q+DDL+ EI  R A++ERVLVTTLTKRMAE+LT YL   G R  Y+HSD+D
Sbjct: 423 VIEVRPTLNQIDDLMEEITQRAAVDERVLVTTLTKRMAEELTAYLTRMGIRCNYIHSDVD 482

Query: 482 TVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGR 541
           T+ER++I+ DLR G FDVL+G+NLLREGLD+PEVSLVAILDADKEGFLRS RSL QT GR
Sbjct: 483 TLERIQIMDDLRKGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGR 542

Query: 542 AARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQ 601
           AARN+NGK I Y DKIT SM   + ET RRREKQ AYNE+HGI P+ + K  V ++A  Q
Sbjct: 543 AARNVNGKVIFYADKITDSMRLTMDETARRREKQLAYNEKHGITPKQVIKNSVSLVAEKQ 602

Query: 602 NIAKTKTKGRGKSRSPVEADTVA--LTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQ 659
                +     +    + AD V   +  K L++ I   + QMM+ A+ L+F EAAQ RD+
Sbjct: 603 QPVTGEPYAYVEPEPSLVADPVVQYMNRKQLEKAIERTKKQMMEAAKKLDFIEAAQFRDE 662

Query: 660 LHQLRELFI 668
           L +L +L +
Sbjct: 663 LVKLEDLLV 671