Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 732 a.a., uvrABC system protein B from Phaeobacter inhibens DSM 17395

 Score =  777 bits (2006), Expect = 0.0
 Identities = 393/675 (58%), Positives = 498/675 (73%), Gaps = 19/675 (2%)

Query: 3   KPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMV 62
           + F +H+ F P+GDQP AI+ L EG+ +G  +Q LLG TG+GKTFT+A VI + QRP ++
Sbjct: 28  REFVMHTEFDPAGDQPTAIKELSEGVLEGERNQVLLGATGTGKTFTMAKVIEETQRPAII 87

Query: 63  LAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122
           LAPNKTLAAQLYGE K FFPEN+VEYFVS+YDYYQPEAYV  SDT+IEK++ +NE I++M
Sbjct: 88  LAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDYYQPEAYVARSDTYIEKESQINEQIDRM 147

Query: 123 RLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYT 182
           R SAT++LLER DV+++ASVS IYG+G  + Y  M   L VG   DQR ++  L   QY 
Sbjct: 148 RHSATRSLLERDDVIIIASVSCIYGIGSVETYSAMTQDLKVGDEYDQRQVMADLVAQQYK 207

Query: 183 RNDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPRFT 242
           RNDQAFQRG+FRVRG+ ++IFPA  +D A R+  F EE+E ++ FDPLTG    T  +  
Sbjct: 208 RNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLSFFGEELEGITEFDPLTGEKTGTFDQIR 267

Query: 243 VYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELGY 302
           VY  +HYVTP+  + QA+  IK EL  R   L+   KLLE QRL QRT FD+EM+   G+
Sbjct: 268 VYANSHYVTPKPTLKQAVISIKEELKMRLDQLVGEGKLLEAQRLEQRTNFDIEMLEATGH 327

Query: 303 CSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETLV 362
           C+GIENYSRYL+GR PGEPPPTLF+++P + ++  DESHV++PQIGGMY+GD  RK TL 
Sbjct: 328 CNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDHRRKFTLA 387

Query: 363 EYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDPI 422
           E+GFRLPS +DNRP+KFEE++A+ PQ+++VSATP  +EL++S     +QV+RPTGLLDP 
Sbjct: 388 EHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSKWELEQSSGVFAEQVIRPTGLLDPQ 447

Query: 423 IEVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDT 482
           +E+RPV  QVDDLL E+R  TA   R LVTTLTKRMAEDLTEY+ E G +VRY+HSDIDT
Sbjct: 448 VEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDIDT 507

Query: 483 VERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 542
           +ER+EI+RDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTIGRA
Sbjct: 508 LERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA 567

Query: 543 ARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQN 602
           ARN  G+ I+Y D+IT SM +A+GET RRR+KQ AYNEEHGI P  + K V D+LA    
Sbjct: 568 ARNAEGRVIMYADRITGSMERALGETNRRRDKQIAYNEEHGITPATVKKNVEDVLA---- 623

Query: 603 IAKTKTKGRGKSRSPVEADTVALT------PKALQQKIHELEGQMMQHAQNLEFEEAAQI 656
                    G     V+ + V  T         L+  +  L  QM + A+NLEFEEAA++
Sbjct: 624 ---------GLYAGDVDMNRVTATIDKPMHGANLEAHLAGLREQMRKAAENLEFEEAARL 674

Query: 657 RDQLHQLRELFIAAS 671
           RD++ +L  + +A S
Sbjct: 675 RDEVKRLEAVDLAVS 689