Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Klebsiella michiganensis M5al

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  150 bits (378), Expect = 6e-41
 Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 12/298 (4%)

Query: 33  LAIALFGWANPVFLTFDNWANLLQGSAILLIVAMAMTLIVSAGAIDLSVGVALDFGAAFA 92
           L +    W    FLT +N   +L   ++  ++A+ MT +V +  IDLSVG  L F    A
Sbjct: 36  LKVVQGAWPENTFLTVNNLMLILHQISVNGVLAVGMTFVVISAGIDLSVGSVLAFSGMMA 95

Query: 93  --LVALKTWHLPWQAA------VGCALLGGVIIGLLNAFLILVCQIRPFLATLGTWFIAS 144
             +        PW         +  AL  G + G L+ ++I   +I+ F+ATLG   +A+
Sbjct: 96  ASMATRSVGVTPWSDTYPVIFPIIAALGVGALCGGLSGWIIARFRIQAFIATLGM-LLAA 154

Query: 145 SAERIYTDGGGSISYRRMAPEYHDLAVGNIAG-IPTPVVIVLALWLAAWLMTERTLFGKY 203
               +   GG  IS   ++P++     G +   IP PVVI+  ++L AW++  +T+FG+Y
Sbjct: 155 RGFTMSVTGGNPIS--GLSPDFRWFGTGKLFEVIPVPVVILALVFLLAWVILNKTVFGRY 212

Query: 204 VRAIGQNGEAARIAGIRDRRTMLWVLVAASALCAVGGVILSANLRQFTPLAGQAYLMDAI 263
           V A+G N ++AR +GI     ++WV V A  L  V GVIL+A        AG +Y +DAI
Sbjct: 213 VYAVGGNEKSARTSGINTGAILIWVYVVAGFLAGVAGVILTAKTGSAQTSAGSSYELDAI 272

Query: 264 AAVFIGTAFNRLGRVSIAGTLGGVLFLAIIDNGLNLMGLNYLVKDALVGVILVVALAL 321
           AAV IG A    G   + GT  G L + +++NGL+++G+    +  + G ++VVA+ L
Sbjct: 273 AAVVIGGASLAGGVGRLTGTFFGALIIGVMNNGLDILGVQSFYQLIIKGGLIVVAVIL 330