Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Klebsiella michiganensis M5al

Subject, 328 a.a., ribose ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  167 bits (423), Expect = 3e-46
 Identities = 109/312 (34%), Positives = 168/312 (53%), Gaps = 20/312 (6%)

Query: 17  SPLAWLSRAGFGGITLLAIALFGWANPVFLTFDNWANLLQGSAILLIVAMAMTLIVSAGA 76
           SPLA L  AG   ++LL     G A+  F T  NW N+L+  +I+ I+A+ M+ ++  G 
Sbjct: 27  SPLA-LPLAGLVVVSLL----MGLASDNFFTLSNWFNVLRQVSIVGILAVGMSFVILTGG 81

Query: 77  IDLSVGVALDFGAAFALVALKTWHLPWQAAVGCALLGGVIIGLLNAFLILVCQIRPFLAT 136
           IDLSVG A+      +   +    LP   A+ C +     IGLLN  L+   ++   + T
Sbjct: 82  IDLSVGAAMALAGTISAGLIVNSGLPAPLALLCGVGLATCIGLLNGALVAWGRMPAIIVT 141

Query: 137 LGTWFIASSAERIYTDG------GGSISYRRMAPEYHDLAVGNIAGIPTPVVIVLALWLA 190
           L T  +A     IY+ G       G IS+           VG I  +P PV+++L ++  
Sbjct: 142 LATMGVARGVGLIYSGGYPISGLPGWISW---------FGVGRIGMVPVPVILMLIVYAL 192

Query: 191 AWLMTERTLFGKYVRAIGQNGEAARIAGIRDRRTMLWVLVAASALCAVGGVILSANLRQF 250
           AWL+ +RT FG++V AIG N  AAR++G++  R  L V   +     +  +IL+  L   
Sbjct: 193 AWLLLQRTAFGRHVYAIGGNEMAARLSGVKTTRIKLAVYAISGFTSGLAAIILTGRLMSG 252

Query: 251 TPLAGQAYLMDAIAAVFIGTAFNRLGRVSIAGTLGGVLFLAIIDNGLNLMGLNYLVKDAL 310
            P AG  + +DAIAAV +G      GR  + GTL G + L I++NGLNLMG+N  ++D +
Sbjct: 253 QPNAGVGFELDAIAAVVLGGTAIAGGRGLVVGTLIGAVLLGILNNGLNLMGINPYLQDII 312

Query: 311 VGVILVVALALS 322
            GVI+++A+ ++
Sbjct: 313 RGVIILLAIYIA 324