Pairwise Alignments

Query, 333 a.a., sugar ABC transporter permease from Klebsiella michiganensis M5al

Subject, 347 a.a., ABC transporter for L-fucose, permease component (from data) from Herbaspirillum seropedicae SmR1

 Score =  157 bits (397), Expect = 4e-43
 Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 21/311 (6%)

Query: 32  LLAIALFGWANPVFLTFDNWANLLQGSAILLIVAMAMTLIVSAGAIDLSVGVALDFGAAF 91
           LL I  F +A+P F+  DN  ++LQ +A+  ++A+A T ++    IDLSVG  + F A  
Sbjct: 44  LLMILFFSFASPNFMEVDNLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVM 103

Query: 92  ALVALKTWHLPWQAAVGCALLGGVIIGLLNAFLILVCQIRPFLATLGTWF-------IAS 144
           A V L  W +P    +  A+  G + G ++  +I   ++ PF+ATLG          + S
Sbjct: 104 AGVVLTNWGMPLPLGIAAAIFFGALSGWISGMVIAKLKVPPFIATLGMMMLLKGLSLVIS 163

Query: 145 SAERIY---TDGGGSISYRRMAPEYHDLAVGNIAG---IPTPVVIVLALWLAAWLMTERT 198
               IY   T+G  +I+         D  +G++     IP  V+I+  + + A ++  +T
Sbjct: 164 GTRPIYFNDTEGFSAIA--------QDSLIGDLIPSLPIPNAVLILFLVAIGASIILNKT 215

Query: 199 LFGKYVRAIGQNGEAARIAGIRDRRTMLWVLVAASALCAVGGVILSANLRQFTPLAGQAY 258
           +FG+Y  A+G N EA R++G++     + V   + A+C + G+I+++ L    P  GQ Y
Sbjct: 216 VFGRYTFALGSNEEALRLSGVKVDFWKVAVYTFSGAICGIAGLIIASRLNSAQPALGQGY 275

Query: 259 LMDAIAAVFIGTAFNRLGRVSIAGTLGGVLFLAIIDNGLNLMGLNYLVKDALVGVILVVA 318
            +DAIAAV IG      G  +I GT+ G   ++++ NGL +M +    +  + GVI+++A
Sbjct: 276 ELDAIAAVVIGGTSLSGGTGTILGTIIGAFIMSVLVNGLRIMSVAQEWQTVVTGVIIILA 335

Query: 319 LALSFWQARLR 329
           + L   + R R
Sbjct: 336 VYLDILRRRRR 346