Pairwise Alignments

Query, 359 a.a., RND transporter MFP subunit from Klebsiella michiganensis M5al

Subject, 385 a.a., RND efflux system, membrane fusion protein CmeA from Pseudomonas fluorescens FW300-N1B4

 Score =  172 bits (437), Expect = 1e-47
 Identities = 124/369 (33%), Positives = 186/369 (50%), Gaps = 13/369 (3%)

Query: 2   NKIIRSALLACGLAGYAL-----AAAAAPAVPVRVVTVEQAPHAGERQISGRVEAIHSVD 56
           N + R +L+A  L   A      A   AP   VRV TVE  P +   ++SGR+ A    +
Sbjct: 4   NLLARLSLIALALTLSACDQSSTAEEQAPLATVRVETVEARPLSISSELSGRIVAPRIAE 63

Query: 57  IRARTEGKIVQRHFQDGQYVNQGDLLFTLDDAQPKAALALAQAELKSAQASLRQAQQLLS 116
           +RAR  G ++Q+ F++G  V +GD+LF +D A  KA L  A+A L+ A+A+  QA+    
Sbjct: 64  VRARVAGVVLQQAFREGSDVKKGDVLFRIDPAPFKADLDSAEAALRKAEANAFQARLQEQ 123

Query: 117 RYQQLINNHAIGRNDLDTAQMQRDVAAAAVEQARARIAAQQITLGYTRITSPVSGRVGHS 176
           RY QLI  +AI   D D A+      AA V   +A +   ++ LGY  +T+P+SGR+G +
Sbjct: 124 RYAQLIEGNAISGQDYDNARANARQTAADVAANKAAVERAKLNLGYATVTAPISGRIGRA 183

Query: 177 PFHVGSLVNP-ASGVLVDVVQLDPIRVAFS-----LDETVFFAKAGQHTDIA-ALKEAWL 229
               G+LV    +  L  + QL+PI    +     L++     ++GQ  ++     +A L
Sbjct: 184 LVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNDLRRAFRSGQLKEVGQGQAKATL 243

Query: 230 AQVDVDGRREDGVLTSVDNRIDSRTASVALRAEFANPQHRLLPGGNVTIFFRPRQLQESP 289
            Q D       G L   D  +D  T  + LR+EF NP   LLPG  V +       Q+  
Sbjct: 244 IQDDGSLYPLPGKLLFTDITVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAFNQQGI 303

Query: 290 MIPAAAMQQDAQGFYS-WVLTADNTVTMRRLTPAGQQGQQFAVAEGLLPGERVVTEGAQR 348
            +P  A+Q+D+ G     VL A+  V  + +     Q  ++ V  GL PG+R+VTEG Q 
Sbjct: 304 SVPQRAIQRDSAGIAQVLVLDAEQRVGQQPVELGAVQNDRWIVTNGLKPGDRIVTEGLQH 363

Query: 349 LRDGAAVQL 357
            R G  VQ+
Sbjct: 364 ARPGEKVQI 372