Pairwise Alignments

Query, 414 a.a., miniconductance mechanosensitive channel from Klebsiella michiganensis M5al

Subject, 416 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  342 bits (876), Expect = 2e-98
 Identities = 175/389 (44%), Positives = 255/389 (65%), Gaps = 1/389 (0%)

Query: 22  IIIFGIIFLTAIVVHLILHKVVLRTFEKRAQASSHLWLQIITQNKLFHRLAFTLQGIIVN 81
           +++F  + L A + ++++ + V+ T     Q S   W  I  Q+++  +LA  +  +I+N
Sbjct: 29  VMVFACL-LIAFIGYVVVKRGVVSTMNIVIQRSKVRWDDIFMQHRVLEKLAKLVPALILN 87

Query: 82  VQAVLWLQKGSEAAEILTTCAQLWVMIYAMLSFFSLLDVVFNLSQKFATASQLPLKGIFQ 141
           +   L L +    + +      + ++I  + + +S+LD    ++     + +LP+K   Q
Sbjct: 88  ILLPLALVEHPLLSSLADRLLDVAIVILFVRAVYSVLDAGNEIADVNQISRRLPIKSFVQ 147

Query: 142 GIKLVCAIIVGILVISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDML 201
            +KL    +  ++ IS+L  QSP   +SGLG    ++MLVFKD ILG VAGIQL+AN M+
Sbjct: 148 LLKLFMFFVAIVISISVLAEQSPVYFLSGLGVATGLVMLVFKDTILGFVAGIQLAANRMV 207

Query: 202 KLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRR 261
             GDW++M KYGADGAV ++ LTTVKV+NWD TIT IP ++LVSD+FKNW GMS SGGRR
Sbjct: 208 SPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKTITMIPAYALVSDAFKNWRGMSESGGRR 267

Query: 262 IKRSLNIDTTSIHFLDEQEQQRLIQARLLKPYMDSRHQEISLWNQQNAADQSILNQRKMT 321
           IKR++NID  SI FL +++ +RL +  LLK Y+  +  EI+ +N +       +N R +T
Sbjct: 268 IKRAVNIDIDSIAFLSDEQLKRLGKINLLKEYLARKEVEIAEFNAKIQDGDMPVNSRNLT 327

Query: 322 NIGTFRAYLQEYLRNHPRIRKDMTLMVRQLAPDANGLPIEIYCFTNTVVWAEYESIQADI 381
           N+GTFRAYL EY+R HP++ ++MTL+VRQLAP   GLPIEIY FTN   WA YE IQADI
Sbjct: 328 NVGTFRAYLLEYMRKHPKVHQEMTLLVRQLAPTTEGLPIEIYIFTNDTRWAFYEDIQADI 387

Query: 382 FDHVFAVVDEFGLRIHQSPTGNDIRSLAG 410
           FDH++A++ +F LR  Q+PTG D+RSL G
Sbjct: 388 FDHIYAILPQFNLRAFQAPTGADVRSLKG 416