Pairwise Alignments

Query, 414 a.a., miniconductance mechanosensitive channel from Klebsiella michiganensis M5al

Subject, 392 a.a., hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  355 bits (910), Expect = e-102
 Identities = 180/379 (47%), Positives = 249/379 (65%)

Query: 30  LTAIVVHLILHKVVLRTFEKRAQASSHLWLQIITQNKLFHRLAFTLQGIIVNVQAVLWLQ 89
           L A + + I+H+ V+R        S   W  +  + K+  +LA  +  I++N+   + L 
Sbjct: 7   LVAAISYFIMHRGVIRAVNMVILRSRVTWDDVFMRYKVLEKLAMLVPAIVLNLLVPITLT 66

Query: 90  KGSEAAEILTTCAQLWVMIYAMLSFFSLLDVVFNLSQKFATASQLPLKGIFQGIKLVCAI 149
           +    + ++     +W++I  + + ++ LD V  +S     + +LP+K   Q  KL    
Sbjct: 67  EHPVLSSLVDRLLSIWLVILMIRAIYAGLDAVNEISDINEVSRRLPVKSFVQLFKLFLFF 126

Query: 150 IVGILVISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEM 209
           +  I+ +S+L  QSP   +SGLG     +MLVF+D ILG VAGIQL+AN M+  GDW++M
Sbjct: 127 VGLIVCLSVLADQSPVYFLSGLGVATGFVMLVFRDTILGFVAGIQLAANRMVSKGDWIQM 186

Query: 210 PKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSLNID 269
            KYGADGAV ++ LTTVKVRNWD TIT IP ++LVSD+F+NW GMS SGGRRIKR++NID
Sbjct: 187 DKYGADGAVEEVSLTTVKVRNWDKTITMIPAYALVSDAFRNWRGMSESGGRRIKRAVNID 246

Query: 270 TTSIHFLDEQEQQRLIQARLLKPYMDSRHQEISLWNQQNAADQSILNQRKMTNIGTFRAY 329
             SI FL E +++RL +   LK Y  ++  EI   N + +    ++N R +TN+GTFRAY
Sbjct: 247 INSIKFLTENDRKRLSKINCLKEYFPAKISEIQASNAKVSDLDMMVNGRHLTNVGTFRAY 306

Query: 330 LQEYLRNHPRIRKDMTLMVRQLAPDANGLPIEIYCFTNTVVWAEYESIQADIFDHVFAVV 389
           LQEYL+ H ++ KDMTLMVRQLAP   GLPIE+Y FTN   WA YE+IQADIFDH+FAV+
Sbjct: 307 LQEYLQRHDKVHKDMTLMVRQLAPTTEGLPIEVYIFTNDTRWAFYEAIQADIFDHIFAVL 366

Query: 390 DEFGLRIHQSPTGNDIRSL 408
            EFGL+  Q+PTGNDIRSL
Sbjct: 367 PEFGLQAFQAPTGNDIRSL 385