Pairwise Alignments

Query, 334 a.a., sucrose operon repressor from Klebsiella michiganensis M5al

Subject, 337 a.a., LacI family transcription regulator from Herbaspirillum seropedicae SmR1

 Score =  132 bits (332), Expect = 1e-35
 Identities = 106/333 (31%), Positives = 165/333 (49%), Gaps = 15/333 (4%)

Query: 7   TIKDIAELAGVSKATASLVLNGRGKELRVAQETRERVLAIAREQHYQPSIHARSLRDNRS 66
           TIKD+A LAGVS  T S VLN   +   V+ + RERVLA  +E  Y PS  ARSLR   +
Sbjct: 3   TIKDVARLAGVSYTTVSHVLN---QTRPVSSDARERVLAAVKELDYVPSALARSLRSKVT 59

Query: 67  HTIGLVVPEITNYGFAVFSHELEMLCREAGVQLLISCTDENPGQESMVVNNMIARQVDGL 126
            +IGL++P  TN  F+  +  +E  C  AG  +++  +D++P ++   +  +  +  DGL
Sbjct: 60  GSIGLIIPNNTNPYFSELARGIEDHCYGAGYSVILCNSDDDPDKQRDYLQVLQTKHCDGL 119

Query: 127 IVASCMHADADYL-KLSEQLPVVLFDRYPNESALPLVMTDSITPTAELIARIAPQHRDEF 185
           I+A+   AD +   KL   +P VL DR P E  + LV TD+    +     +    R   
Sbjct: 120 IIATLNQADLNPAGKL--DIPTVLLDRAPKELDIDLVSTDNAVGGSLAARHLLDLRRCRV 177

Query: 186 WFLGGQPRLSPSRDRLAGFTQGLAQAGIELRPEWVINGNYHPSSGYEMFAALCARLGRP- 244
             + G   L  S +R+ GF Q L Q G+ L    +++ ++    GY+  AA+    GRP 
Sbjct: 178 ACIAGPDGLELSDERVRGFRQTLEQGGLALADSDLLHADFSGIGGYQ--AAMRLLQGRPA 235

Query: 245 ---PKALFTAACGLLEGVLRYMSQHHL-LDSDIHLASFDDHYLYDSLSLRIDTVQQDNRQ 300
              P A+F     +  GVLR   +  + +  ++ +  FDD  L   +   + TV Q+ R+
Sbjct: 236 DQRPDAIFCCNDMMAIGVLRAAGELQIEVPGELSVVGFDDIELAQFVHPPLTTVAQNTRK 295

Query: 301 LA-WHCYDLISQLIDGNTPEPLQRYLPATLQFR 332
           L       L+ ++ D + P   +   P  LQ R
Sbjct: 296 LGNLTAQFLLERIADPSLPARRETVAP-QLQLR 327