Pairwise Alignments

Query, 410 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

Subject, 441 a.a., sugar ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 89/365 (24%), Positives = 151/365 (41%), Gaps = 62/365 (16%)

Query: 4   NTLAALILTTLAAGQLVSLQ-------AHAAGQLNVWEDIKKSDGIKAAVNDFEKQFNVK 56
           NT  A+I T      L+ L        +    +L VW      D  +AA +  +   ++ 
Sbjct: 3   NTTRAVIATAAIGALLIPLAGCGNTTTSSGKTELTVWSWDASID--RAAKSFMKANPDIT 60

Query: 57  VNVQEMPYAQQL-EKLRLDGPAGIG-PDVLVIPNDQLGGAVVQGLLSPLTLDQAK----- 109
           V V  +   ++    L     AG G PDV +I  + L  A+ Q + S   +D +K     
Sbjct: 61  VKVSNVGSTEETYTALNNAAQAGSGLPDVTLI--EYL--AIPQFVHSDTLMDLSKVYNTA 116

Query: 110 --QEAFTPASINAFHMDNVLYGVPKAVETLVLIYNKDLIDK-----PLDSLQAWFDYSKK 162
             ++ FTP + N+ +++  LY +P     +   Y+KD+ DK     P  +   +++ +KK
Sbjct: 117 KLKDTFTPGTWNSVNINGGLYAMPADSGPMAYFYDKDVFDKAGISEPPTTWDEFYEDAKK 176

Query: 163 QREEGKYGLLAKFDQIYYSWGAIGPMGGYIFGKN----------DKGGFNPQDVGLNKPG 212
            R  G Y      D   ++   +  MGG+ +  N          DKG     D+   K  
Sbjct: 177 IRATGSYITSDSGDAGLFN-AMMWAMGGHAYKLNDDKLTINIAKDKGAQRFMDL-WQKMR 234

Query: 213 AVEAVTFLKKFYTDKVFPAGILGDNGLNAIDSLFTEKKAAAVINGPW----AFQPYEAAG 268
             + +    K +TD    +  LGD  +            A++I+G W      Q    A 
Sbjct: 235 DEDLIDVHTKTWTDDWMKS--LGDGSI------------ASLISGAWMANNLLQGVPQAT 280

Query: 269 IHYGVAPLPTLPDGKPMSSFLGVKGYVVSTWSKDKAL--AQQFIEFI-NQPQYVKARYVA 325
             + VA LPT+ DG P++   G  G  ++    D  L  A++F+E++    + + AR V+
Sbjct: 281 GKFRVALLPTI-DGTPINGEYGGSGLAITKKIPDGKLDAAKKFVEYVTTNDEGIDAR-VS 338

Query: 326 TGEIP 330
            G  P
Sbjct: 339 NGSFP 343