Pairwise Alignments

Query, 590 a.a., multidrug ABC transporter permease/ATP-binding protein from Klebsiella michiganensis M5al

Subject, 601 a.a., ABC transporter, ATP-binding protein MsbA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  254 bits (650), Expect = 5e-72
 Identities = 180/589 (30%), Positives = 303/589 (51%), Gaps = 22/589 (3%)

Query: 3   LFAQLSWYFRREWRRYLGAIALLIVIAILQLVPPKVVGIVVD------------GV---T 47
           +F +L  Y +     +L ++  LIV  ++       +G  +D            G+   T
Sbjct: 12  VFKRLMGYLKPMKGMFLLSVVGLIVYGLVDAAFISFIGPFIDKGFSSSAPAISNGIALPT 71

Query: 48  KQHYTAEKVWMWIGLLVVIAVMVYLLRYVWRVLLFGASY---QLAVELREDFYRQLSRQH 104
            Q + A+   + +  +VVI +M  L  +   V  +G SY   +L +++R+  +       
Sbjct: 72  SQGFHADNQVLLMAPIVVI-LMFSLRGFANFVSTYGISYMSARLIMDMRQQVFEHYLSLP 130

Query: 105 PAFYLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLA 164
            ++  +  TG+LI++ T D +++  A+G  ++++V   V    +L +M    SW+L+L  
Sbjct: 131 VSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDSVTIIGMLGLMFYN-SWKLSLCI 189

Query: 165 LLPMPLMALAIKRNGDALHERFRVAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFA 224
           L+  P+M + I        +  +  Q A   ++  T++ +   + + AFG ++ ++A FA
Sbjct: 190 LVIGPIMGVVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGGQETETARFA 249

Query: 225 ADAADTGAKNMRVARIDARFDPTIYIAIGTANLLAIGGGSWMVIQGSLTLGQLTSFVMYL 284
                   +NM++A   A   P I +    A    +   S   ++  LT G   + +  +
Sbjct: 250 KINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADLTAGTFATILGAM 309

Query: 285 GLMIWPMLALAWMFNIVERGSAAYARIRTMLEEAPVVNDGSEPTPEGRGTLSVAVREFIY 344
             M+ P+  L  +    +RG AA   +  +L+  P  + G+      +G L      F Y
Sbjct: 310 MAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTVPESDTGTYTVARAKGNLRFDNVSFSY 369

Query: 345 PQANKASLEKVNFTLQPGQMLGICGPTGSGKSTILALIQRHFDVTE-GDIRFHDVPLTRL 403
               + +LEK++F +  GQ L + G +GSGKSTI +L+ R +   E GDI   DV +   
Sbjct: 370 EGQERRALEKIDFEVSQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDILLDDVSIYDY 429

Query: 404 QLDSWRARLAVVNQTPFLFSDTVASNIALGKP-DATQEQIEHVARLASVHEDILRLPQGY 462
            L S R+++A+V+Q   LF+DT+A+NIA   P + T+EQI   A LA   E I +LP G 
Sbjct: 430 SLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIIEAATLAHAMEFIEQLPDGL 489

Query: 463 NTEVGERGVMLSGGQKQRISIARALLLEAEILILDDALSAVDGRTEHQILHNLRQWGEGR 522
           +T+VGE GV+LSGGQ+QRI+IARA+L +A +LILD+A SA+D  +E  I   L    + R
Sbjct: 490 DTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQGLDNLRQNR 549

Query: 523 TVIISAHRLSALTEASEILVMQHGHIAQRGRHEALAAQPGWYRDMYRYQ 571
           T ++ AHRLS +  A +ILV+  G I +RG H++L    G Y  +Y+ Q
Sbjct: 550 TSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQ 598