Pairwise Alignments

Query, 424 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Klebsiella michiganensis M5al

Subject, 414 a.a., ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  406 bits (1044), Expect = e-118
 Identities = 211/391 (53%), Positives = 273/391 (69%), Gaps = 9/391 (2%)

Query: 15  CSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEV-----APHRERSALPTPHE 69
           CSFCG+S++EV  LI G + YICD C     +I +E + E      A       LP P E
Sbjct: 10  CSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEALGEGRKRAGATKLNLKELPKPVE 69

Query: 70  IRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLA 129
           I+  LD YVIGQ+ AK+ L+V+VYNHYKRL   D+ + VE+ KSNI+++G TG+GKTLLA
Sbjct: 70  IKKFLDQYVIGQDDAKRFLSVSVYNHYKRLLQKDSGDDVEIEKSNIIMVGSTGTGKTLLA 129

Query: 130 ETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKI 189
            T+A+LL VPFT+ DAT LTEAGYVGED+E+I+ +LLQ  DY+V +A++GIV+IDEIDKI
Sbjct: 130 RTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKI 189

Query: 190 SRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGG 249
           +RK DNPSITRDVSGEGVQQ LLKL+EG+V  VPPQGGRKHP Q+ + V+T  ILFICGG
Sbjct: 190 ARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGG 249

Query: 250 AFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLSQVEPEDLIKFGLIPEFIGRLP 309
           AF G++K I+ R+ T      G T   K+    +  ++  + P+DL  FGLIPE IGRLP
Sbjct: 250 AFDGIEKKIAQRLNTHV---VGYTASQKTAVIDKNNMMQYIAPQDLKSFGLIPEIIGRLP 306

Query: 310 VVATLSELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAKKAMARKTGA 369
           V+  L+ L   AL  IL EPKN++ KQY  LF ++G +L F D   + I  KA+  K GA
Sbjct: 307 VLTYLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGIKLTFEDSVFEYIVDKAVEYKLGA 366

Query: 370 RGLRSIVEAALLDTMYDLPSMEDVE-KVVID 399
           RGLRSIVE  ++D M+++PS    E KV +D
Sbjct: 367 RGLRSIVETIMMDVMFEIPSESKKEYKVTLD 397