Pairwise Alignments

Query, 491 a.a., muropeptide transporter AmpG from Klebsiella michiganensis M5al

Subject, 519 a.a., AmpG permease from Pseudomonas fluorescens FW300-N2E2

 Score =  158 bits (399), Expect = 5e-43
 Identities = 89/256 (34%), Positives = 141/256 (55%), Gaps = 21/256 (8%)

Query: 6   LRIFTQPKSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLW 65
           L  +  P + +LL+LGFA+GLP  L   TL  W+    +  +TIG+ SL+G AY FK++W
Sbjct: 10  LAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYAFKWVW 69

Query: 66  SPLMDRYTPPFLG---RRRGWLLATQFLLLIAIAAMGFLEPSTQLRWMAALAVVIAFCSA 122
           SPL+D++  P LG   RRR WL+ +Q L+++ +  MGF +P   L W+ A+AV++AF SA
Sbjct: 70  SPLLDQWRLPLLGKLGRRRSWLVLSQGLVILGLVGMGFCDPQKHLSWLIAIAVIVAFASA 129

Query: 123 SQDIVFDAWKTDVLAAEERGTGAAISVLGYRLGMLVSGGLALWLAD---------RWLGW 173
           +QDI  DA++ ++     +   AA  + GYR+  L++   AL+ A+         +   W
Sbjct: 130 TQDIAVDAYRLEIADDTRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGFSYKHSAW 189

Query: 174 QGMYWLMAALLIPCIIATLLAPDPSDVIPVP-KTLEQAVAAPLRDFFGRNNAWLILLLIV 232
            G Y L   L++P ++ +L   +P    PVP +T  QA     R  F    A + +L+++
Sbjct: 190 AGTYLLFGVLMVPALLTSLFMREP----PVPLRTQLQAG----RYSFAHQLASVFVLIVL 241

Query: 233 LYKLGDAFAMSLTTTF 248
           L  +   F     T F
Sbjct: 242 LVSVPAMFTQLYNTDF 257



 Score =  103 bits (257), Expect = 1e-26
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 18/242 (7%)

Query: 162 LALWLADRWLGWQGMYWLMAALLIPCIIATLLAPDPSDVIPVPKTLEQAVAAPLRDFFGR 221
           L L L DR      +Y ++ AL +  +    LAP               V  P+ DF  R
Sbjct: 268 LDLLLEDRAFLRAILYIILTALCLSAVGRRGLAP---------------VLTPVNDFILR 312

Query: 222 NN--AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGMVNKTLGLFATIVGALYG 279
               A L+L LI  Y++ D     +   F I   GF   ++  V+K  GL  T+VGA  G
Sbjct: 313 YRWQALLLLGLIATYRMSDTVMGVMANVFYI-DQGFTKDQIASVSKIFGLIMTLVGAGMG 371

Query: 280 GVLMQRLTLFRALLIFGVLQGVSNAGYWLLSITDKHLFSMATAVFFENLCGGMGTAAFVA 339
           G+L+ R  +   L I GV    +N  + +L+    +L  +   +  +N   G+ T+AFVA
Sbjct: 372 GLLIVRFGILPILFIGGVASAGTNILFLMLTDMGANLKMLIVTISLDNFSSGLATSAFVA 431

Query: 340 LLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPAFYLFSVVAAVPGILLL 399
            L +L N  FSATQ+ALLS++  +    +G  +G  VE  G+  F+L + +  VP +LL+
Sbjct: 432 YLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFGYHNFFLITALLGVPTLLLI 491

Query: 400 LI 401
            +
Sbjct: 492 AL 493