Pairwise Alignments

Query, 491 a.a., muropeptide transporter AmpG from Klebsiella michiganensis M5al

Subject, 461 a.a., ampG protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  229 bits (585), Expect = 1e-64
 Identities = 147/442 (33%), Positives = 235/442 (53%), Gaps = 41/442 (9%)

Query: 6   LRIFTQPKSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLW 65
           L ++   +  ILL+LGF++GLPL L   TL  W+    +D  +IG+FS +  AY FK+ W
Sbjct: 14  LSVYYHKRVLILLLLGFSAGLPLMLVFSTLSFWLREAGVDRTSIGYFSWIALAYAFKWAW 73

Query: 66  SPLMDRYTPP----FLGRRRGWLLATQFLLLIAIAAMGFLEPSTQLRWMAALAVVIAFCS 121
           SPL+DR + P    FLGRRR W+L  Q LL+ AI  M F +P   L  +A  A+++AF S
Sbjct: 74  SPLVDRLSIPILTRFLGRRRSWMLFAQLLLVGAILGMSFSDPVKNLERLALFALMVAFAS 133

Query: 122 ASQDIVFDAWKTDVLAAEERGTGAAISVLGYRLGMLVSGGLALWLADRW----------L 171
           A+QDIV DA++ +    + +   AA   +GYR  M+V+   AL +A  W          +
Sbjct: 134 ATQDIVIDAFRIESAPEKMQAALAAAYQVGYRSAMIVATAGALTIA-AWVEPGNTEYNLI 192

Query: 172 GWQGMYWLMAALLIPCIIATLLAPDPS-DVIPVPKT---LEQAVAA-------------- 213
            WQ  Y +MA L+   ++ TL + +P  D     KT   ++Q ++A              
Sbjct: 193 AWQTSYLVMAGLMFIGVLTTLFSREPMVDTRSADKTELAVKQRLSARYPKPIAASLSWIY 252

Query: 214 -----PLRDFFGR--NNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGMVNKT 266
                P  DFF R   +A LILLLI  Y++ D     +   F +  +GF   E+  ++K 
Sbjct: 253 TASVLPFIDFFKRYGRSAILILLLISCYRISDIVMGIMANVFYV-DMGFTKEEIAYLSKI 311

Query: 267 LGLFATIVGALYGGVLMQRLTLFRALLIFGVLQGVSNAGYWLLSITDKHLFSMATAVFFE 326
            GL  T+VGA +GGVL+ R    + L +  +L  V+N  +   ++   ++  +  A+  +
Sbjct: 312 YGLIMTLVGAAFGGVLLARFGTMKILFLGALLVAVTNLLFAWQAVIGYNVSFLTFAISVD 371

Query: 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPAFYL 386
           N   G+ TAAF+A L +L +  +SATQ+ALLS++  +   ++   +G +V+A G+  F++
Sbjct: 372 NFSAGIATAAFIAYLSSLTSSGYSATQYALLSSIMLLFPKFIAGFSGAYVDAFGYVNFFV 431

Query: 387 FSVVAAVPGILLLLICRRTLEH 408
            + V   P +LL+ +  +   H
Sbjct: 432 AASVIGFPVLLLIHLVNKYAPH 453