Pairwise Alignments

Query, 455 a.a., murein transglycosylase D from Klebsiella michiganensis M5al

Subject, 587 a.a., transglycosylase, SLT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  162 bits (411), Expect = 2e-44
 Identities = 140/474 (29%), Positives = 222/474 (46%), Gaps = 58/474 (12%)

Query: 5   AILLASVLLVGCQASKNDGTVQQHAQSLSAA---SQGEASKFTSRA-RWLDDGT-FYAQD 59
           A++  S+ + GC   K   ++    ++   A   S G + +    A   +DDG      +
Sbjct: 22  ALVALSISVSGCATRKPLSSLPADKETACPAPEKSSGSSDEVVELAIPPVDDGLPLSPAE 81

Query: 60  QDLWTSIGDELKMGIPENVRIREQKQKYL--RNKSYLHDVTLRAEPYMYWIAGQVKKRNM 117
           Q    S G+  +   PE+ R      KY   R +  +  +  R++ Y+ ++   ++KR +
Sbjct: 82  QAALASTGEVDRNLSPEDYRAVVLHFKYYTHRARGTMERLARRSQNYLPYVREVLRKRGL 141

Query: 118 PMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRSYDARRDIVASTTAAL 177
           P EL  L IVES ++P+A S + A GIWQ +P TG+ YGL      D RRD   +T +A 
Sbjct: 142 PEELAYLAIVESGYNPNAVSSSGAVGIWQFMPYTGKLYGLDYDWWIDERRDPYKATHSAA 201

Query: 178 NMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKANKSRGKPTDFWSL-----------SL 226
           + + +L   F+ DW L +AAYN+GEG++ +A+    ++G    F+ L            L
Sbjct: 202 SYLAKLYGDFN-DWHLALAAYNAGEGKIGRALAGTGAKG----FFELVRRNESLDEKARL 256

Query: 227 PQETKIYVPKMLALSDILKNSKRYGIRLPTADESRAL--ARVRLDSPVEISQLADMAGMP 284
             ETK YVP+ +A++ I++N +  G      D S A+    VR+    ++  LA  +GM 
Sbjct: 257 KDETKQYVPRFIAITKIMRNLQSLG--FAPLDTSCAIRPVEVRVRPGTDLMALAQASGMS 314

Query: 285 VSKLKTFNAGVKGSTLGANGPNYVLVPQKHAA----QLRESLASGDIAAVQPTQLADNRP 340
            +     N   +          YV  P  H+     + R   A   +A  Q    A  +P
Sbjct: 315 WASFSDLNPAFR---------RYVSPPDAHSVIYLPEARREAALAYLAKPQTRNYAGWQP 365

Query: 341 LTSRSYQVRSGDTLSGIASRLGVSAKDLQQWNGIRGSGLKVGQNLVIGAGSSAE------ 394
                Y VR GDTL  +  R GV    L+Q N +R + LKVG  L+I  G+  E      
Sbjct: 366 -----YTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIPGGTHHEPDTGPA 420

Query: 395 ---RLANNSDSITYRVRKGDSLSSIAKRHGVNIRDVMRWN--SDTGNLKPGDQL 443
               LA    S  Y V++GD+L SIA+  GV +  +M+ N  ++   L+ G +L
Sbjct: 421 IKRALAERRGS--YIVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKL 472



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 61/228 (26%), Positives = 90/228 (39%), Gaps = 73/228 (32%)

Query: 274 ISQLADMAGMPVSKLKTFNAGVKGSTLGANGPNYVLVPQKHAAQLRESLASGDIAAVQPT 333
           + ++   AG+PVS LK  N  V+ + L       +L+P             G       T
Sbjct: 374 LERVGKRAGVPVSVLKQVNK-VRSNNLKVGST--LLIP-------------GGTHHEPDT 417

Query: 334 QLADNRPLTSR--SYQVRSGDTLSGIASRLGVSAKDLQQWNGI-RGSGLKVGQNLVIGAG 390
             A  R L  R  SY V+ GDTL  IA   GV    L Q NG+     L+VGQ L I  G
Sbjct: 418 GPAIKRALAERRGSYIVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLYIPGG 477

Query: 391 SSAER--------------------------------------------------LANNS 400
           S A                                                     A  +
Sbjct: 478 SEAPAPQPVATSKPEKPQAPVARATSTPEPRQLVASVTAMPVSAAKAPSRSAGPSAAVKT 537

Query: 401 DSITYRVRKGDSLSSIAKRHGVNIRDVMRWN---SDTGNLKPGDQLTL 445
            ++TY+V++GD++ +IA++  V+ +++MR N    DT  L+PGD +T+
Sbjct: 538 KTVTYKVQQGDTMWAIARKFNVHPKELMRQNRLEMDT-VLRPGDSITV 584