Pairwise Alignments

Query, 1160 a.a., DNA polymerase III subunit alpha from Klebsiella michiganensis M5al

Subject, 1184 a.a., Probable DNA polymerase III (alpha chain) DnaE1 (DNA nucleotidyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  668 bits (1723), Expect = 0.0
 Identities = 426/1193 (35%), Positives = 650/1193 (54%), Gaps = 71/1193 (5%)

Query: 6    FVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPI 65
            FVHL  H++YSM+DG AK  P++ +   LGMPA+ +TD  N+ G  +FY +   AGIKPI
Sbjct: 10   FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNSATKAGIKPI 69

Query: 66   VGAD--------FHVQSDLLGD------------ELSQLTVLAANNAGYQNLTLLISKAY 105
            +G +        F  +  L GD              + LT++A N  G +NL  L S A 
Sbjct: 70   IGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRNLFKLSSHAS 129

Query: 106  QRGYGAAGPIIDRDWLIELKEGLILLSGGRMGDVGRSLLRG-NMALVDQCVDFYEQHFPD 164
              G  +    +D + + E  EG+I+ +G   G+V   L  G +   ++    + E   PD
Sbjct: 130  FEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAAKWREIVGPD 189

Query: 165  CYFLELIRTGRQDEEPYLHAAVGLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFT 224
             YFLEL+  G   E       + +     +P +ATND  ++       HE  + +  G T
Sbjct: 190  NYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEALLCVQTGKT 249

Query: 225  LDDPKRPRNYSPQQYMRSEEEMCELFSD-IPEALQNTVEIAKRCN--VTVRLGEYFLPQF 281
            L DP R +      Y++S  EM +++ D +P A  +T+ IA+R      V      +P F
Sbjct: 250  LSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVWTPRDRMPVF 309

Query: 282  PTGDMTTE-DYLVKKSKEGLEERLEFLFPDPDERTKRRPEYDERLDIELQVINQMGFPGY 340
            P  D   +  +L  +   GL  R     PD          Y ER   E+ VI   GFP Y
Sbjct: 310  PVPDGHDQASWLRHEVDAGLRRRFPAGPPDG---------YRERAAYEIDVICSKGFPSY 360

Query: 341  FLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP 400
            FLIV + I +++  G+ VGPGRGS AGSLVAYAL ITD+DP+   LLFERFLNPER SMP
Sbjct: 361  FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420

Query: 401  DFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRV-LGHP-YGFVDR 458
            D D+DF   +R +++ + AD +G D V+Q+ITFGT+  KA ++D  R+  G P +   DR
Sbjct: 421  DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480

Query: 459  ISKLVPPD--------PGMT--LAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA 508
            I+K +PP          G+T    + ++   ++  + E D +V+ +   AR LEG+ RNA
Sbjct: 481  ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540

Query: 509  GKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQFDKNDVEYAGLVKFDFLGLRTLTIINWA 568
            G HA  V+++   +T+  PL+        +T +D    E  GL+K DFLGLR LTII  A
Sbjct: 541  GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600

Query: 569  LEMINARREKNGEGPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCF 628
            ++ + A R  +    LD+ ++PLDDK ++++L R +T  VFQL+   M+DL++R+QP  F
Sbjct: 601  IDNVRANRGID----LDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGF 656

Query: 629  EDMIALVALFRPGPLQSGMVDNFIDRKHGREEIS--YPDVQWQHECLKPVLEPTYGIILY 686
            ED++A++AL+RPGP+     +++ DRK+ R+ I   +P+++   E L+ +L  TYG+I+Y
Sbjct: 657  EDVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELE---EPLREILAETYGLIVY 713

Query: 687  QEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEMAKQRGTFEEGARKRGVDGELAIKIFD 746
            QEQ+M+IAQ+++ Y+L  AD+LR+AMGKKK E + K+   F +G +  G        ++D
Sbjct: 714  QEQIMRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWD 773

Query: 747  LVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWR 806
             +  FA Y FNKSH+A Y +VSY T +LKA+YPAE+MA ++T+  D+ +K    + +C +
Sbjct: 774  TILPFADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRK 833

Query: 807  MGLKILPPDIN-SGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNQGGYFRELFDL 865
            +G+ +LPPD+N SGL    V  D  I YG+GA++ VG   + ++++ RN  G F +  D 
Sbjct: 834  LGITVLPPDVNESGLNFASVGQD--IRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDY 891

Query: 866  CARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFG 925
              + DI   N++V E LI +GAFD LG  R  L     DA+ +     KAEA+GQ D+FG
Sbjct: 892  LNKIDISACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFG 951

Query: 926  VLAEEPEQIEQSYANCQP---WPEQVVLDGERETLGLYLTGHPIN----QYLKEIERYVG 978
               +     +  +    P   W ++  L  ERE LGLY++GHP+N        +++  + 
Sbjct: 952  SNDDGTGTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIP 1011

Query: 979  GVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKY 1038
             +   D+ P D        G++ +    V K G       L+D +G +EVM F      Y
Sbjct: 1012 AILDGDV-PND--AQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSY 1068

Query: 1039 QQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLL 1098
               +  D +++V+ +V+  D    + + A ++   D +  +  R LA+SL  RQ     +
Sbjct: 1069 GADIVDDAVVLVNAKVAVRD--DRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKV 1126

Query: 1099 NRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIG 1151
            + L+Q L  H  GT  VHL     D    L    + RV+PS  L+ DL+ L+G
Sbjct: 1127 SALKQVLARH-PGTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLG 1178