Pairwise Alignments

Query, 497 a.a., general secretion pathway protein GspE from Klebsiella michiganensis M5al

Subject, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

 Score =  558 bits (1439), Expect = e-163
 Identities = 298/496 (60%), Positives = 378/496 (76%), Gaps = 11/496 (2%)

Query: 5   AERRPL--LPFGYARAHSVMLLSSGE--SCEVFCLAVTAPQALLEARRVAAMPFRLERLE 60
           AER+ +  LPF +A    ++L  + +     ++ LA  + +AL+E +RV    F+L  L 
Sbjct: 9   AERQSIRRLPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELS 68

Query: 61  EEAFEKLLVLSYQRDSAEARRMMADIGNELD-LYTLAEELPDTDDLLDSEDDAPIIRLIN 119
           +  FE  L   YQRDS+EAR++M DIG + D  ++LAEELP  +DLL+SEDDAPII+LIN
Sbjct: 69  QAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLIN 128

Query: 120 AMLTEAIKEKASDIHIETYERHLQIRFRVDGVLREILRPQRRLAALLISRIKVMASLDIA 179
           AML EAIKE ASDIHIET+E+ L IRFRVDGVLRE+L P R+L++LL+SR+KVMA LDIA
Sbjct: 129 AMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIA 188

Query: 180 EKRIPQDGRMALRIGGRAVDVRVSTLPSSYGERVVLRLLDKNSVNLDLLTLGMTPALLRQ 239
           EKR+PQDGR++LRIGGRAVDVRVST+PSS+GERVV+RLLDKN+  LDL +LGMT      
Sbjct: 189 EKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDN 248

Query: 240 VDGLIARPHGIVLVTGPTGSGKSTTLYAALSRLDARERNIMTIEDPIEYELEGIGQTQVN 299
              LI RPHGI+LVTGPTGSGKSTTLYA L  L++ ERNI+T+EDPIE++++GIGQTQVN
Sbjct: 249 FRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVN 308

Query: 300 AKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGAIS 359
            +VDMTFARGLRAILRQDPDVV+VGEIRD ETAQIAVQASLTGHLV+STLHTN+A+GA++
Sbjct: 309 PRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVT 368

Query: 360 RLQDMGVEPFLLSTSLLAVMSQRLVRRLCPHCRQQEPANADTAHQ----MEIAPGTALWQ 415
           RL+DMG+EPFL+S+SLL V++QRLVR LCP C+  EP  AD   +     +      L++
Sbjct: 369 RLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCK--EPYEADKEQRKLFDSKKKEPLILYR 426

Query: 416 PRGCAECGFTGYRGRTGIHELLLVDDRVRMAIHRGENEVTLIQQLGTDYMTLRRAGREKA 475
             GC +C   GYRGRTGIHELLLVDD ++  IH    E  + + +     ++R  G +K 
Sbjct: 427 ATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKV 486

Query: 476 LAGITSWQEVLRVTEQ 491
             GITS +EV+RVT++
Sbjct: 487 RQGITSLEEVMRVTKE 502