Pairwise Alignments

Query, 355 a.a., secretion protein from Klebsiella michiganensis M5al

Subject, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 5e-28
 Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 12/328 (3%)

Query: 34  PLTPDSTVMRVVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPFINKVEAAQIALE 93
           P T   + +   TP+ S V G V  V V  N  + +GD+L+ +DP PF   V   +  ++
Sbjct: 52  PFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVK 111

Query: 94  QAKLSNQQLDAQIASARANLRTAQYTARNDKV--TFDRYQRLSTMQNVSQSDLDKVRTTW 151
           +A      L++ +  A+A +  A   A  DK    +DRYQR       ++  +D  R T+
Sbjct: 112 EASQGALGLESTLKEAQAAVLKA--IAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTY 169

Query: 152 QTSEQSVSALNASIQNLLIQRGERDDARNVTLQKYRNALEEAQLNLGWTKVRAETDGMVS 211
           + ++ ++    +  +   I         N T+ +    L +A+ +L  T VRA TDG V+
Sbjct: 170 KAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVT 229

Query: 212 NLQLNPGLYAT--AATPLLALVSNQTDI-VADFREKSLRHTGVNTDAAVVFDALPGKVFR 268
            L L PG+ +      P++  V  +  I  A FR+ SL+       A  +F ALPGKVF+
Sbjct: 230 QLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFK 289

Query: 269 AHVTSSDAGILAGQEEVNGQLSQPEQSTRWVRDAQRMRIHVALDEPLDK-PLPTGARATV 327
             V      I   Q +  G L      T  +R + R+ + + + + L +  LP G+   V
Sbjct: 290 GEVIEVLPAIGESQIQARGAL----LGTDALRTSGRVFVTLRITDDLSQYHLPMGSAVEV 345

Query: 328 QLYNSDGPFARTFAGAQIHLVSLLHYVY 355
            +Y+             I + S  +Y+Y
Sbjct: 346 AVYSDSFEHVSIMRKVLIRMKSWQNYLY 373