Pairwise Alignments

Query, 147 a.a., DNA polymerase III subunit chi from Klebsiella michiganensis M5al

Subject, 153 a.a., DNA polymerase III chi subunit, HolC (RefSeq) from Shewanella loihica PV-4

 Score =  108 bits (269), Expect = 5e-29
 Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKNATFYLLDN-DTQQDGLSAVEQ-----LVCDIAAERWRSGKRVLIACEDEQQAIRLDE 54
           M NA FYL+    +    ++  EQ       C +A + +R  + V I C D+QQA  +DE
Sbjct: 1   MPNALFYLMPQASSAATNVAKAEQESVYLFACRLAEQAYRGQQLVYIHCNDQQQAYEVDE 60

Query: 55  ALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRLNFADFATAFTEVI 114
            LW     +FVPHNL GEGP GGAPVEI + +   +  R +LI+L      FA  F ++I
Sbjct: 61  ILWQFEPSAFVPHNLKGEGPTGGAPVEIGFDKLGPNKNRHLLINLADQAPQFAVNFGQII 120

Query: 115 DFVPYEDSLKQLARERYKAYRMAGFNLNT 143
           DFV  + ++K  AR+RY+ YR  G  L T
Sbjct: 121 DFVANDAAMKATARDRYRQYRELGIPLTT 149