Pairwise Alignments
Query, 500 a.a., ABC transporter from Klebsiella michiganensis M5al
Subject, 520 a.a., ABC transporter for L-fucose, ATPase component (from data) from Herbaspirillum seropedicae SmR1
Score = 365 bits (936), Expect = e-105
Identities = 194/489 (39%), Positives = 299/489 (61%), Gaps = 4/489 (0%)
Query: 9 ILRTEGLSKFFPGVKALDNVNFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGAIWL 68
++ + K FPGV ALDN F L GE+ AL+GENGAGKSTL+K L+GVY D G I L
Sbjct: 22 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILL 81
Query: 69 EGREISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPRR-FGL-LQRKEMEKRA 126
+G+ + AQ LGIG ++QE+NL+ ++S A N+FIGREPR+ GL + E+ ++A
Sbjct: 82 DGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQA 141
Query: 127 TALMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVEMLFT 186
A+ A +D P+ +VA QQ+V I +A+ ++VLI+DEPTA+L+ E+ LF
Sbjct: 142 AAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFR 201
Query: 187 LMRQLRDSGVSLIFVTHFLDQVYAVSDRITVLRNGGFVGCRETRELPQIELVKMMLGREL 246
++R L+ GV +++++H +D++ ++DR++V+R+G ++ +E ++ MM+GR L
Sbjct: 202 IIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRAL 261
Query: 247 EHNALQRAGRTLLSDKPVAAFEDFGKKGTIAPFNLQVRPGEIVGLAGLLGSGRTETAEVI 306
+ QR + V + I + +R GEI+G AGL+G+GRTE A I
Sbjct: 262 DGE--QRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVARAI 319
Query: 307 FGIKPADSGKAWIKGKPQTLRSPHQASCLGIGFCPEDRKTDGIIAAASVRENIVLALQAQ 366
FG P ++G+ I G ++SP A GIG+ EDRK G+ V+ NI L+ +
Sbjct: 320 FGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGR 379
Query: 367 RGWLRPISRREQNEIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVLLSRWLLTKPQFLIL 426
+ + +R E A+ ++RQL I+TPS EQ LSGGNQQK+++++WLL L
Sbjct: 380 FTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFF 439
Query: 427 DEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRQQVAELAL 486
DEPTRGIDVGA +EI +L++ L G A+++ISSEL E++ + RV++M + + ELA
Sbjct: 440 DEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELAR 499
Query: 487 SELSVPAIM 495
++ + IM
Sbjct: 500 ADATQEKIM 508
Score = 101 bits (251), Expect = 7e-26
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 10/242 (4%)
Query: 260 SDKPVAAFEDFGKK--GTIAPFNLQ--VRPGEIVGLAGLLGSGRTETAEVIFGIKPADSG 315
S PV A + K+ G +A N Q + GE+ L G G+G++ +++ G+ DSG
Sbjct: 18 SSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSG 77
Query: 316 KAWIKGKPQTLRSPHQASCLGIGFCPEDRKTDGIIAAASVRENIVLALQAQRGWLRPISR 375
+ GKP + P QA LGIG ++ ++AA +NI + + ++ I
Sbjct: 78 DILLDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAA---QNIFIGREPRKAMGLFIDE 134
Query: 376 REQN-EIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVLLSRWLLTKPQFLILDEPTRGID 434
E N + A F R PS P+ L+ QQ V +++ L + LI+DEPT ++
Sbjct: 135 DELNRQAAAIFARMRLDMDPST--PVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALN 192
Query: 435 VGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRQQVAELALSELSVPAI 494
AE+ R+I L A G+ ++ IS +++EL ADRV +MRD + +A + + E S+ I
Sbjct: 193 NAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTI 252
Query: 495 MN 496
++
Sbjct: 253 IS 254
Score = 78.2 bits (191), Expect = 7e-19
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 10/243 (4%)
Query: 9 ILRTEGLSKFFPGVKALDNVNFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGAIWL 68
+L GL++ +A+ +V+F+LR+GEI+ G GAG++ + +A+ G + G I +
Sbjct: 277 VLEVRGLNRG----RAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIII 332
Query: 69 EGREISPKNTAHAQQLGIGTVYQE---VNLLPNMSVADNLFIGREPR--RFGLLQRKEME 123
G + K+ A A GIG + ++ L M V N+ + R R G + ++ +
Sbjct: 333 HGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRVGFMDQRAIR 392
Query: 124 KRATALMASYGFSL-DVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVE 182
+ A + V + S QQ + I + + +L DEPT +D
Sbjct: 393 EAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKS 452
Query: 183 MLFTLMRQLRDSGVSLIFVTHFLDQVYAVSDRITVLRNGGFVGCRETRELPQIELVKMML 242
++ L+ L + G +++ ++ L +V +S R+ V+ G G + Q +++++
Sbjct: 453 EIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLAT 512
Query: 243 GRE 245
RE
Sbjct: 513 QRE 515