Pairwise Alignments

Query, 500 a.a., ABC transporter from Klebsiella michiganensis M5al

Subject, 516 a.a., sugar ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  471 bits (1213), Expect = e-137
 Identities = 250/507 (49%), Positives = 338/507 (66%), Gaps = 10/507 (1%)

Query: 3   GEQHQEILRTEGLSKFFPGVKALDNVNFSLRRGEIMALLGENGAGKSTLIKALTGVYHAD 62
           G Q + +L   G+ K F GVKAL +V   L  GE+  L+G+NGAGKSTLIK LTGV+  D
Sbjct: 6   GTQARPMLELSGIHKAFAGVKALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPD 65

Query: 63  RGAIWLEGREISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPRRFGLLQRKEM 122
            G I L+GR I+P +T  AQ LGI TVYQEVNL PN+SVA+N+F+GR P RFG +  K +
Sbjct: 66  GGKIELDGRAIAPASTLEAQALGISTVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSV 125

Query: 123 EKRATALMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVE 182
             ++  L+      +DV  PL+ + +A+QQ+VAI RA+ +SAKVLILDEPT+SLD  EV+
Sbjct: 126 HTQSRQLLQQLQIDIDVAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQ 185

Query: 183 MLFTLMRQLRDSGVSLIFVTHFLDQVYAVSDRITVLRNGGFVGCRETRELPQIELVKMML 242
            LF ++R+LR+ G++++FVTHFLDQ Y +SDRITVLRNG   G     EL +++LV  M+
Sbjct: 186 QLFKVLRRLREQGMAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMV 245

Query: 243 G-RELEHNALQRAGRTLLSDKPVAA---------FEDFGKKGTIAPFNLQVRPGEIVGLA 292
           G   ++H  ++     L S+    A          E FG++G +AP +LQ+R GE+ GL 
Sbjct: 246 GVTAVDHRKVEAGAEALASELSTDAAAAGAVFLQAEGFGRRGVLAPQDLQLRRGEVFGLC 305

Query: 293 GLLGSGRTETAEVIFGIKPADSGKAWIKGKPQTLRSPHQASCLGIGFCPEDRKTDGIIAA 352
           GLLGSGRTE A ++FG   AD G+  I+GK   L  P  A   GIGFC EDRK +G I  
Sbjct: 306 GLLGSGRTEMARLLFGADRADCGQLRIEGKEVRLNVPRDAIAAGIGFCSEDRKKEGAILE 365

Query: 353 ASVRENIVLALQAQRGWLRPISRREQNEIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVL 412
            SVRENI+LALQA++G  R + R+ QN+IA  +++ LGI+T   E PI  LSGGNQQK L
Sbjct: 366 LSVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKAL 425

Query: 413 LSRWLLTKPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRV 472
           L+RWL T P  LILDEPTRGIDV A  EI+  +  +C  G+++L ISSE+ E++  +DR+
Sbjct: 426 LARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRM 485

Query: 473 IIMRDRQQVAELALSELSVPAIMNAIA 499
           +++RDR+   E    EL   +++  IA
Sbjct: 486 LVLRDRRACGEYRRGELDEQSVLQVIA 512



 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 6/221 (2%)

Query: 29  NFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGAIWLEGREISPKNTAHAQQLGIGT 88
           +  LRRGE+  L G  G+G++ + + L G   AD G + +EG+E+       A   GIG 
Sbjct: 293 DLQLRRGEVFGLCGLLGSGRTEMARLLFGADRADCGQLRIEGKEVRLNVPRDAIAAGIGF 352

Query: 89  VYQE---VNLLPNMSVADNLFIGREPRR--FGLLQRKEMEKRATALMASYGF-SLDVREP 142
             ++      +  +SV +N+ +  + R+  F +L RK   + A   +   G  + D+  P
Sbjct: 353 CSEDRKKEGAILELSVRENIILALQARQGLFRVLPRKRQNQIAADYVKWLGIKTADLETP 412

Query: 143 LNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVEMLFTLMRQLRDSGVSLIFVT 202
           +   S   QQ   + R +     +LILDEPT  +D +  + +   +  +   G+S++F++
Sbjct: 413 IGLLSGGNQQKALLARWLATDPGMLILDEPTRGIDVRAKQEIMDFVIAMCRKGMSILFIS 472

Query: 203 HFLDQVYAVSDRITVLRNGGFVGCRETRELPQIELVKMMLG 243
             + +V   SDR+ VLR+    G     EL +  +++++ G
Sbjct: 473 SEIPEVLRCSDRMLVLRDRRACGEYRRGELDEQSVLQVIAG 513