Pairwise Alignments

Query, 447 a.a., membrane protein from Klebsiella michiganensis M5al

Subject, 427 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (416), Expect = 4e-45
 Identities = 108/414 (26%), Positives = 221/414 (53%), Gaps = 25/414 (6%)

Query: 5   ILVILCLIAVSAFFSISEISLAASRKIKLKLLADDGNINAQRVLKMQENPGMFFTVVQIG 64
           ++++  LI +SA+FS SE ++ +  + +L+ LA++G+  A+R +++ E P     ++ IG
Sbjct: 10  VIILFVLIIISAYFSGSETAMMSLNRYRLRHLANNGHKGAKRAIRLLERPDRLIGLILIG 69

Query: 65  LNAVAILGGIVGDAAFSPAFYGLLSRYLSPELSEQLSFIISFTLVTSLFILFADLTPKRI 124
            N V IL   +             +  L   L   +   I+  ++T + ++FA++TPK +
Sbjct: 70  NNLVNILASAI-------------ATILGIRLFGDVGVAIATGVLTLVVLVFAEVTPKTV 116

Query: 125 GMIAPEAVALRIINPMRFCLFIFRPLVWLFNGMANNIFRLFKIPMVRKDD-ITSDDIYAV 183
             + PE +A      ++  L +  PLV + N + +   RL  I  V+ DD ++ +++  V
Sbjct: 117 AALHPERIAFPSSVLLKALLVLLSPLVKIVNFITSTFLRLLGIRSVKADDALSQEELRTV 176

Query: 184 V-EAGALAGVLRKQEHELIENVFELESRTVPSSMTSRENVIWFDLHEDEQSLKNKVAEHP 242
           V EAGAL   + ++  E++ ++ +LE  TV   M  R ++   ++++D   +  +V + P
Sbjct: 177 VHEAGAL---IPQRHQEMLLSIMDLEKVTVEDIMIPRSDLYAINVNDDFSRINKQVIQSP 233

Query: 243 HSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLVLTGGVQ-IRNTLIVPDTLTLSEALES 301
           H++ L+  ++ID  +G+V  +D L R+ + Q    +  ++ ++    +P+   L+  L +
Sbjct: 234 HTRVLLYRDNIDDAVGFVHLRDAL-RLQSKQQFSKSSLLRAVKEIYFIPEGTPLNVQLAN 292

Query: 302 FKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGL---EEQIVARDENSWLIDGG 358
           F+   E   ++++EY  + G++TL D++  ++GD     +    E I  + + S+LID  
Sbjct: 293 FQQNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMITTPSEDINQQQDGSFLIDAT 352

Query: 359 TPIDDVMRVLDIDDFPQSGNYETIGGFMMFMLRKIPKRTDAVKFSGYKFEVVDI 412
             I D+ + +D   FP  G  +T+ G ++  L +IP+   +++ SGY  EVV++
Sbjct: 353 INIRDLNKEMDW-HFPIDGP-KTLNGLILEYLEEIPEPNTSMRLSGYPLEVVEV 404