Pairwise Alignments

Query, 1108 a.a., miniconductance mechanosensitive channel MscM from Klebsiella michiganensis M5al

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 2/208 (0%)

Query: 880  LLMLIGGLVGFSMIGIEWSKLQWLIAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDT 939
            ++ +IG LVG S IG+  + +       GV +GF LQ+  +NF +G+++L  +P  +GD 
Sbjct: 352  VVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDF 411

Query: 940  VTIRDLTGSVTRINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPV 999
            V    + G V+ ++   TTI  +D + IIVPN   I    I     + + RV +      
Sbjct: 412  VHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSK-IWGDVIKNVTHERIRRVDMVFGIGY 470

Query: 1000 DANTEEVAQILLNAAHRCSLVIDTPAPEAFLVDLQQGIQIFELRIYAAEMGHRMPLRHEM 1059
              +  +   +L +       V+ TP P   +  L      F +R +  +      +  ++
Sbjct: 471  SDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPW-VKTDDYWDVYWDV 529

Query: 1060 HQLILAGFREHGIDMPFPPFQMRLESID 1087
             + +   F   GI +PFP   + L  +D
Sbjct: 530  TKEVKLRFDREGISIPFPQQDVHLHLVD 557