Pairwise Alignments

Query, 1108 a.a., miniconductance mechanosensitive channel MscM from Klebsiella michiganensis M5al

Subject, 854 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score =  136 bits (342), Expect = 8e-36
 Identities = 213/892 (23%), Positives = 367/892 (41%), Gaps = 128/892 (14%)

Query: 235  REAEKALESTELL--AENSENLPPDIVAQFKVNRELSQALNQQA--QRMDLIASQQRQAT 290
            +E E ++E T     A  ++ L P    Q     E +Q   Q    Q  D  +   +QA 
Sbjct: 30   QEPEPSVEQTRPAQQAAPAQPLQPAQSVQPAPQAEPAQPATQTGTGQAPDAASPVLQQAE 89

Query: 291  NQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPE------IPRPQQLDTEMAQLR 344
            +Q  Q  + L  L E++  +   + +   LR QV  L +      +P   +LD   A+L 
Sbjct: 90   DQLAQADRELKRLIERTNAVEDDDAMLAELRVQVDELSKQIIAASVPTRPRLDEIKARLT 149

Query: 345  VQRLRYEDQLGKQPQLRQIRQADGEP-----LTSEQNRILQAQMRTQTELLNSLLRGGDT 399
                    +LG  P        +G+P     +T E+ R+L      +   +N+L    + 
Sbjct: 150  --------ELGDPP-------GEGQPPEDAVITDERKRLL-----AERGAINALTGRAEN 189

Query: 400  LMLELTKLKVANGQLEDALKEINEATHRYLFWTSDVSPIGFSWPLEIVQDLRRLISLDTM 459
            L +E  KL     ++    + I   T   L   +DVS    S  +         +S    
Sbjct: 190  LSVEARKLA---NRITATRRAIFSNT---LLRHTDVSAAMLSEAVTATMHEAMALSRSIG 243

Query: 460  SQLGKA----SMMMLTSKETLLPLFVALILVGFSISSRRHFTSFLERSSARVGKVTQDHF 515
              L  A     + +L++    L L  AL+   F +   R F+  L R      +  +  +
Sbjct: 244  GWLTFAWNYKRVPLLSA--IFLSLCAALL---FLVGGYRLFSPVLMRHE----EDDEPTY 294

Query: 516  WLTLRTVFWSILVASPLPVLWMTLGYGLQAAWPF---PLAVAIGDSVTATVPLLWVVMIC 572
            +  L   FWS L+ +     +    Y   +++      +A  +  ++   V L ++  + 
Sbjct: 295  FRQLSLAFWSTLIPTLALAAFAMSSYFFLSSFNVLRPDIAPIVAITLAMGVVLFFIARLA 354

Query: 573  ATFARPNGLFVAHFGWPRSRVSKAMRYYLMSIGLIVPLI-MALITFDNLNDREFSASLGR 631
                 PN        W   RVS      LM     VP+  MAL+   +      S SLG 
Sbjct: 355  GAVLSPN-----RSSWRLVRVSDRGAKMLM-----VPIFAMALVNGLDYLLGSISESLGS 404

Query: 632  LCFMLICGA------LAMVTLSLK------RAGIPLYLDKEGSGDNMLNRLLWNMLLGAP 679
               + I  +      + ++ +S+       RA  P   D  G     +  L + +LLGA 
Sbjct: 405  PVVLTIAKSFVASIIIGLILMSMAWIRPVLRADEPY--DAPGRPWPRVISLSF-LLLGAA 461

Query: 680  LVAMLAAAIGYLATAQALLARLETSVAIWFLLLVVYHIIRRWMLIQRRRLAFDRAKHRRA 739
            L+A   A  GY+  A+ +  ++  + AI   L+ VY  +     + ++  AF       A
Sbjct: 462  LIA--TALSGYVGLARFIATQITVTSAI---LVTVYIGLLTGKSVSKQG-AF-------A 508

Query: 740  EILAQRARGEEEAQHTSSPEGSMEAEVSEVDLDAISTQSLRLVRSLLMLIALVSVIVLW- 798
            E +A R    E   H           +  V LD     +   +  L++   +  +++ W 
Sbjct: 509  ETVAGRYL--ERRFH-----------LEPVALDQFGLFAGLGIYVLVLSFFIPLILMQWG 555

Query: 799  ---SEIHS-AFSFLENISLWDVTSTVQGVESLEPITLGAVLIAILVLIITTQLVRNLPAL 854
               ++I S A+  L  I +  +T ++ G+       L  VL+  L  ++T  + R     
Sbjct: 556  FKTADIESWAYQVLTEIRIGTITISLVGI-------LAGVLLFALGFLVTRWVQR----W 604

Query: 855  LELAILQHLELTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLIAALGVGLGFG 914
            ++  ++    +  G   +I T   Y+ + I GL+G S  GI+ S L  +  AL +G+GFG
Sbjct: 605  IDGNVMARSRVDAGVRNSIRTGIGYMGVGIAGLIGLSAAGIDLSSLALVAGALSLGVGFG 664

Query: 915  LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATTISDWDRKEIIVPNKAF 974
            LQ I +NF+SGLI+L E+P ++GD +      G V RI+ RAT I  +  + I++PN   
Sbjct: 665  LQNIVSNFVSGLILLVERPFKVGDWIVSGTTEGFVRRISVRATEIETFQHQSIMMPNSLL 724

Query: 975  ITEQFINWSLSDSVTRVVLTVPAPVDANTEEVAQILLNAAHRCSLVIDTPAPEAFLVDLQ 1034
            I     NW+  + + R  + V     ++   V ++L   A    +++  PAP       +
Sbjct: 725  INASVGNWTHRNKLGRSEIAVTVTYASDPRRVIELLYEIAAAHPMILKNPAPNVGFTAFE 784

Query: 1035 QGIQIFELRIYAAEMGHRMPLRHEMHQLILAGFREHGIDMPFPPFQMRLESI 1086
                 FELRIY A++     +R+++   I   FR+ GI  PFP   M++E +
Sbjct: 785  DERMTFELRIYVADVLTAGGVRNDLRVSIYERFRDEGIGAPFP---MKIEDV 833



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 17  AYAATAPDAKQIAQELEQAKAAKPAQPET-----------VEVLQSALNALEERNASLER 65
           A  A      Q AQ ++ A  A+PAQP T             VLQ A + L + +  L+R
Sbjct: 42  AQQAAPAQPLQPAQSVQPAPQAEPAQPATQTGTGQAPDAASPVLQQAEDQLAQADRELKR 101

Query: 66  VRQYQDVIDNFPKLSQTLRAQLNNLSDE 93
           + +  + +++   +   LR Q++ LS +
Sbjct: 102 LIERTNAVEDDDAMLAELRVQVDELSKQ 129