Pairwise Alignments

Query, 941 a.a., excinuclease ABC subunit A from Klebsiella michiganensis M5al

Subject, 952 a.a., excinuclease ABC subunit A from Herbaspirillum seropedicae SmR1

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 636/951 (66%), Positives = 775/951 (81%), Gaps = 13/951 (1%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           M++I +RGARTHNLKNINL +PR+KLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC 120
           ARQFL LMEKPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLLYARVG P C
Sbjct: 61  ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120

Query: 121 PDH-DVPLAAQTVSQMVDNVLSQPEGQRLMLLAPIIKERKGEHNKTLENLAGQGYIRARI 179
           PDH + PL AQ+VSQMVD VL+ PE  +LM++AP++  RKGEH    E +  QG++R RI
Sbjct: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHADLFEEMQAQGFVRFRI 180

Query: 180 DG-----EVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALELSGGTAIV 234
                  +V ++ D PKL+  +KHTI+VVIDR KV+ D+  RLAESFETAL L+ G AI 
Sbjct: 181 QSGTGTAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKADIKQRLAESFETALRLADGRAIA 240

Query: 235 ANMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPERV 294
             MD  K  E L+S  FACPICGYS++ELEPRLFSFNNP GACP CDGLG  ++FDP+R+
Sbjct: 241 LEMDSGK--EHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRI 298

Query: 295 IQNPELSLAGGAIRGWDRRNFYYFQMLKSLAEHYEFDVEAPWGTLNSSVQKVVLYGSGKE 354
           +  P LSLA GAI+GWDRRN +YFQML S+A +Y FD++ P+  L+   Q+ VLYGSG++
Sbjct: 299 VAFPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQ 358

Query: 355 NIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCTSCEGTRL 414
            I F Y+N+RG T V+ H FEGV++N++RRY+ET+S AV+EELAKFI+ + C SC G RL
Sbjct: 359 TIPFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARL 418

Query: 415 KREARHVFV----ENTPLPTISDMSIGHAMDFFNNLKLSGQRAQIAEKVLKEIGDRLKFL 470
           + EAR+V V    +   +  ++   +   + FF  LKL+G + +IA++++KEI  RL FL
Sbjct: 419 RVEARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFL 478

Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530
            NVGL+YL+L RSA+TLSGGEAQRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RL+ T
Sbjct: 479 NNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDT 538

Query: 531 LIHLRNLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGKLEDIMAVPESLTGQ 590
           L HLR++GNTV+VVEHDEDAIR AD+V+D+G GAGVHGG V+A G L DI+   +SLT +
Sbjct: 539 LKHLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGPLPDILKNKKSLTAK 598

Query: 591 FMSGKRKIEVPKQRVPANPEKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650
           +++G  +I VPK+R P +  ++L +SGA GNNLK+V L LPVGL TC+TGVSGSGKSTL+
Sbjct: 599 YLNGSLEIAVPKKRTPCDESRMLTISGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLV 658

Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710
           NDTL+  A R L G+   EPA +  + GLEHFDKVI +DQ+PIGRTPRSNPATYTG+FTP
Sbjct: 659 NDTLYLSAARHLYGSQ-TEPAAHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTP 717

Query: 711 VRELFAGVPESRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770
           +R+LFA VP ++ RGY+ GRFSFNV+GGRCEACQGDGVIKVEMHFLPD+YVPCD C GKR
Sbjct: 718 IRDLFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR 777

Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830
           YNRETLE++YKGK I E+LDMT+E+A EFF  VP +ARKLQTL+DVGL YI+LGQSATTL
Sbjct: 778 YNRETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTL 837

Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEH 890
           SGGEAQRVKL+ ELSKR TG+TLYILDEPTTGLHF DI  LL+V+H+LRDQGNT+ +IEH
Sbjct: 838 SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEH 897

Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASYTARFLKPMLK 941
           NLDVIKTADWI+DLGPEGG+GGG I+ +GTPE VA+  AS T ++L P+LK
Sbjct: 898 NLDVIKTADWIIDLGPEGGAGGGRIVAAGTPEEVAKNPASVTGKYLAPLLK 948