Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase RhlB from Klebsiella michiganensis M5al

Subject, 439 a.a., ATP-dependent RNA helicase RhlB (RefSeq) from Shewanella amazonensis SB2B

 Score =  567 bits (1461), Expect = e-166
 Identities = 280/427 (65%), Positives = 351/427 (82%), Gaps = 8/427 (1%)

Query: 1   MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT 60
           MS+THLT+QKF+D  L   V +AL + GF +CTPIQAL+LP+ LE +D+AGQAQTGTGKT
Sbjct: 1   MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT 60

Query: 61  MAFLTSTFHYLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG 120
           +AFL +TF++LLT P    RQ+NQPRA++MAPTRELA+QI  DA  L++ +GLK+G+ YG
Sbjct: 61  LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG 120

Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180
           G+GY+ Q KVL+ GVD+LIGTTGR+IDY +Q  INLGAIQ VVLDEADRM+DLGFIKDIR
Sbjct: 121 GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR 180

Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240
           +LF RMP A +RLNMLFSATLS +V+ELA++ MN+   VE+ PE+KT   IKEE+FYPS 
Sbjct: 181 FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM 240

Query: 241 EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD 300
           E+K++LL +L+EE+WP++AI+FANTK++CE++W  L ADGHRVGLLTGDV QKKRL+IL+
Sbjct: 241 EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE 300

Query: 301 EFTRGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360
           +FT+ ++DILVATDVAARGLHI  V+HV+NYDLPDDCEDYVHRIGRTGRAG  G S+S A
Sbjct: 301 QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA 360

Query: 361 CEEYALNLPAIETYIGHSIPVSKYNSDALMTELPRPLRLTRPRPGNGPR----RNGPPR- 415
           CEEYALNLPAIE YI HSIPV+ Y+ DAL+ ++P P+++ R +P  G R    RNG PR 
Sbjct: 361 CEEYALNLPAIEDYIKHSIPVTSYDRDALI-DIPPPVKIHR-KPHAGGRNLRDRNGSPRP 418

Query: 416 -NRRRSG 421
               RSG
Sbjct: 419 SGSHRSG 425