Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase RhlB from Klebsiella michiganensis M5al

Subject, 435 a.a., ATP-dependent RNA helicase RhlB (RefSeq) from Shewanella loihica PV-4

 Score =  589 bits (1519), Expect = e-173
 Identities = 287/426 (67%), Positives = 351/426 (82%), Gaps = 7/426 (1%)

Query: 1   MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT 60
           MS+THLT QKF+DF+LHP + +AL + GF  CTPIQAL+LP+ LE +D+AGQAQTGTGKT
Sbjct: 1   MSETHLTNQKFADFSLHPEIQQALVESGFEYCTPIQALSLPILLEHKDIAGQAQTGTGKT 60

Query: 61  MAFLTSTFHYLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG 120
           +AFL +TF++LLT P    RQ+NQPRA++MAPTRELA+QI  D E LA+ TGLK+G+ YG
Sbjct: 61  LAFLVATFNHLLTTPIPDGRQLNQPRAIVMAPTRELAIQIAKDGELLAKHTGLKVGIVYG 120

Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180
           G+ Y+ Q KVL+ GVDILIGTTGR+IDY +Q  INL AIQ VVLDEADRM+DLGFIKDIR
Sbjct: 121 GESYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINLSAIQAVVLDEADRMFDLGFIKDIR 180

Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240
           +LFRRMP AN+RLNMLFSATLS +V+ELA++ MN+ E VE+ P +KT   I EE+FYPS 
Sbjct: 181 FLFRRMPDANERLNMLFSATLSMKVQELAYDHMNDPEKVEIAPSEKTSKNITEEIFYPSM 240

Query: 241 EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD 300
           E+KMRLL TL+EE+WP++AI+F+NTKH CE++W HL  DGHRVGLLTGDV QKKR+RIL+
Sbjct: 241 EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWAHLEGDGHRVGLLTGDVPQKKRIRILE 300

Query: 301 EFTRGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360
           +FT+G++DILVATDVAARGLHI  V+HV+NYDLPDDCEDYVHRIGRTGRAG  G S+S A
Sbjct: 301 QFTKGELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA 360

Query: 361 CEEYALNLPAIETYIGHSIPVSKYNSDALMTELPRPLRLTR---PRP----GNGPRRNGP 413
           CEEYALNLPAIE YI HSIPV+ Y+S+AL+ ++P P+R+ R   PRP    G G  + G 
Sbjct: 361 CEEYALNLPAIEHYIQHSIPVTNYDSEALLDDIPPPVRIHRKHSPRPTGRSGGGKPQGGR 420

Query: 414 PRNRRR 419
           P  R R
Sbjct: 421 PGARPR 426