Pairwise Alignments

Query, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Klebsiella michiganensis M5al

Subject, 444 a.a., 23S rRNA 5-methyluridine methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 87.4 bits (215), Expect = 7e-22
 Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 37/366 (10%)

Query: 10  QYEAQLAEKVVRLQKMMAPFSAQVPEVFRSPIS----HYRMRAEFRLWHDGDDLY-HIMF 64
           +  AQ   K   L+ ++       P+    P+S    HYR RA     +  D    ++ F
Sbjct: 98  ELSAQRDAKQTALENLINKMGRTQPQTMSEPLSGEGWHYRRRARLATQYLRDTKQLNLGF 157

Query: 65  DQQTKSRI-RVDTFPAASELINQLMAAVIEGVRDNPVLRHKLFQVDYLTTLSNQAVISLL 123
                S +  +D  P  ++ +++L+A + + +      R  L  V+ L+  S   V+ L 
Sbjct: 158 RALASSEVVNIDACPVLAKSLSELIAPLNQCLNRLSAKR-SLGHVELLSVDSGPCVV-LR 215

Query: 124 YHKKLDDEWRQQAERFRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPV----GGREM 179
               L+D+ +     F      +   V L+     +K+E    + DE LP      G  +
Sbjct: 216 ITSPLNDKDKALLATF-----GEQHKVRLVLLDDDSKLETL--WGDEGLPYYTLEDGSSL 268

Query: 180 IYRQVENSFTQPNAAMNVQMLEWAIDATKDATGD-LLELYCGNGNFSLALARNFERVLAT 238
            +     +F Q N  +N QM+  AID  +   G+ +L+L+CG GNF+L LA+   +V+  
Sbjct: 269 GFSP--GNFIQVNGEINQQMVTQAIDWLQIQPGERVLDLFCGVGNFTLPLAKAGAQVVGV 326

Query: 239 EIAKPSVAAAQYNIAANHIDNVQIIRMSAEEFTQAMNGVRQFNRLQDIDLKSYQCETIFV 298
           E     VA A+ N   + ++  +           A   + + ++L              +
Sbjct: 327 EGVDAMVAQARVNATMSGVEGAEFYHGDLSADLSAAPWLGRIDKL-------------LL 373

Query: 299 DPPRSGLDSETEKMVQAYPR-ILYISCNPETLCQNLE-TLSETHEIARLALFDQFPYTHH 356
           DP R+G     + + +  P+ I+YISCNP +L ++ E  L++ ++++RL L D FP THH
Sbjct: 374 DPARAGAYESLQWLKKMKPKAIVYISCNPVSLARDCEPLLAQGYQLSRLGLIDMFPQTHH 433

Query: 357 MECGVL 362
           +E   L
Sbjct: 434 IEAMAL 439