Pairwise Alignments

Query, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Klebsiella michiganensis M5al

Subject, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  444 bits (1143), Expect = e-129
 Identities = 213/366 (58%), Positives = 279/366 (76%), Gaps = 1/366 (0%)

Query: 1   MTPEHLPTEQYEAQLAEKVVRLQKMMAPFSAQVPEVFRSPISHYRMRAEFRLWHDGDDLY 60
           M  + +  +QY+AQL  K  +L ++   F     EVF S  +HYRMRAEFR+WH+G+DLY
Sbjct: 1   MNVDAMDPQQYDAQLDVKRQKLAQLFVDFETPELEVFASQKAHYRMRAEFRVWHEGEDLY 60

Query: 61  HIMFDQQTKSRIRVDTFPAASELINQLMAAVIEGVRDNPVLRHKLFQVDYLTTLSNQAVI 120
           + MFD+    +IR + F  AS+LIN +M  ++  +R NPVLRHKLFQVD+L+TLS + ++
Sbjct: 61  YYMFDKAQNQKIRCEQFLPASQLINDMMPELMAALRPNPVLRHKLFQVDFLSTLSGEILV 120

Query: 121 SLLYHKKLDDEWRQQAERFRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVGGREMI 180
           SLLYHK+LD +W+++A+  ++AL ++   V +IGRA K K+ +D+D++ E LPV G+++ 
Sbjct: 121 SLLYHKQLDAQWQEEAQALKEALSSK-FKVDIIGRARKQKLVMDRDFVIESLPVNGKQLT 179

Query: 181 YRQVENSFTQPNAAMNVQMLEWAIDATKDATGDLLELYCGNGNFSLALARNFERVLATEI 240
           Y+QVENSFTQPN  + ++MLEWAID T+D++GDLLELYCGNGNFS+ALA+NF RVLATE+
Sbjct: 180 YKQVENSFTQPNGEVAIKMLEWAIDITRDSSGDLLELYCGNGNFSIALAQNFNRVLATEL 239

Query: 241 AKPSVAAAQYNIAANHIDNVQIIRMSAEEFTQAMNGVRQFNRLQDIDLKSYQCETIFVDP 300
           AKPSV +AQYNI AN IDN+QIIRMSAE+FT A+   R F RL+ +DL SY C TIFVDP
Sbjct: 240 AKPSVDSAQYNIEANQIDNLQIIRMSAEDFTDALAKKRSFRRLEGVDLDSYDCNTIFVDP 299

Query: 301 PRSGLDSETEKMVQAYPRILYISCNPETLCQNLETLSETHEIARLALFDQFPYTHHMECG 360
           PR+GLD  T  MVQ Y RILYISCNP TL  NL+ L +TH+I R ALFDQFPYT HME G
Sbjct: 300 PRAGLDDNTLSMVQGYERILYISCNPNTLLDNLKVLDKTHKITRFALFDQFPYTDHMESG 359

Query: 361 VLLTKK 366
           VLL ++
Sbjct: 360 VLLERR 365