Pairwise Alignments

Query, 731 a.a., primosomal protein N' from Klebsiella michiganensis M5al

Subject, 737 a.a., primosomal protein N' (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  721 bits (1862), Expect = 0.0
 Identities = 376/733 (51%), Positives = 499/733 (68%), Gaps = 16/733 (2%)

Query: 6   VALPVPLPRTFDYLL---------PDGMPVKAGCRVRVPFGKQERIGIVTAVSERSELPL 56
           VALPVP+ + F Y +         P   P + G RV+VPFG+Q+ IG+VTA+++  +L  
Sbjct: 7   VALPVPMRQNFTYRVKTNEQNDDSPQAKP-QIGVRVKVPFGRQQLIGLVTAITDSCDLAP 65

Query: 57  DELKLVAEVLDAEPVFSSSVWRLLLWAADYYHHPIGDVLFHALPIMLRQGKPASAAPMWY 116
            +LK V E +D  P+   S+++L LWAA YY    G +L  ALP+ LR+G  A+   + Y
Sbjct: 66  TQLKSVIEFIDDAPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQY 125

Query: 117 WFATEQGQAVDINSLKRSPKQQQALAALRQGKIWRHQVAELEFNDAALQALRGKG-LAEL 175
           W  T  G  +   +LKR+P Q++ L  L+Q  + + +V  LE N  AL+ L  KG +A+ 
Sbjct: 126 WQITTIGSNIAPETLKRAPAQKKLLEHLKQTSLTQEEVISLELNKTALKTLEEKGWIAQH 185

Query: 176 ASEAPAITDWRAGFSVPGERLRLNTEQATAVGAIHSASDSFSAWLLAGITGSGKTEVYLS 235
              A    DWR+   +     RLN EQA AV  + +    +   LL GITGSGKTEVYL+
Sbjct: 186 EKIAQLNLDWRSQLELDETPHRLNKEQAVAVTVL-TQQQGYHCTLLEGITGSGKTEVYLA 244

Query: 236 VLENVLAQGRQALVMVPEIGLTPQTIARFRHRFNAPVEVLHSGLNDSERLSAWLKAKNGE 295
           +LE++L QG+QAL++VPEIGLTPQTI RF+ RF   V VLHSGL D++RL AW +A+ G+
Sbjct: 245 LLEHILKQGKQALILVPEIGLTPQTINRFKRRFRVNVAVLHSGLTDNQRLEAWRQARCGQ 304

Query: 296 AAIVIGTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGS 355
           AAI+IGTRS+LFTP    GVI++DEEHDSS+KQQEG  YHARDLAV R H E IP++LGS
Sbjct: 305 AAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPVVLGS 364

Query: 356 ATPALETLYNVRQGKYRQLKLTKRAGNARPAQQHVLDLKGQQLQAGLSPALIGRMRQHLQ 415
           ATP+LE+L N   G+Y  L+L +RAGNA+  +Q ++D+K   L+AG+S  LI  +R HL 
Sbjct: 365 ATPSLESLQNALSGRYHHLQLGERAGNAKKVRQGIIDIKNLPLKAGMSAPLINEIRSHLD 424

Query: 416 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQC 475
           A NQV+LFLNRRGFAPALLCH+CG + EC RCD+++T+HQ+   +RCHHC +Q  IPRQC
Sbjct: 425 AGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIPRQC 484

Query: 476 PSCGSTHLVPVGLGTEQLEQALGPLFPDIPISRIDRDTTSRKGALEQYLADVNRGGARIL 535
            +CGST L+  G+GTEQL +AL   FP  P+ RIDRDTT  KG+LE +L+ +++G  +IL
Sbjct: 485 HNCGSTMLMGQGIGTEQLAEALQLEFPKYPVVRIDRDTTRLKGSLESHLSAIHKGEYKIL 544

Query: 536 IGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVIL 595
           +GTQMLAKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQV+GRAGRA K G V+L
Sbjct: 545 VGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRANKLGTVLL 604

Query: 596 QTHHPEHPLLQTLLYKGYDAFAGEALTERQSMQLPPWTSHVLIRAEDHNNQQAPLFLQQL 655
           QTH  ++P+L+ LL++GY  FA   L ERQ   LPP    VL+RAE H+   A  FL   
Sbjct: 605 QTHQSDNPILRDLLHRGYGEFARSQLKERQMALLPPAWHMVLVRAEAHSALDADNFLNSF 664

Query: 656 RNLLQASPLADKKLWVLGPVPALAPKRGGRWRWQILLQHPSRVQLQHIVSGTLALINTLP 715
            +LL      DK+  ++GP+PA   ++ G++R Q++ Q   R +LQ        L+  LP
Sbjct: 665 ASLLP----QDKEFEIIGPMPAPLDRKAGKFRRQLMFQAKHRHRLQQEFERIYPLVEQLP 720

Query: 716 EARKVKWVLDVDP 728
           EA++ +W LD DP
Sbjct: 721 EAKRCRWSLDRDP 733