Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B from Klebsiella michiganensis M5al

Subject, 798 a.a., DNA gyrase, B subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  705 bits (1819), Expect = 0.0
 Identities = 399/819 (48%), Positives = 524/819 (63%), Gaps = 44/819 (5%)

Query: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIVVT 62
           N+Y + SI +L+GL AVRKRP MYIG TD   GLHH+V+EVVDN+IDEA+AG+C  +VV 
Sbjct: 7   NNYTADSITILEGLSAVRKRPAMYIGSTD-ARGLHHLVYEVVDNSIDEAMAGFCSKVVVK 65

Query: 63  IHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122
           +H DNSV+V D+GRGIP  +HP+EG  A EV+MT LHAGGKFD+N+YKVSGGLHGVGVS 
Sbjct: 66  LHLDNSVTVSDNGRGIPVDMHPKEGRPAVEVVMTKLHAGGKFDNNAYKVSGGLHGVGVSC 125

Query: 123 VNALSQKLELVIQRDNKIHRQMYAHGVPQAPLAVTGETEKTGTMVRFWPSYETF-TNVVE 181
           VNALS+ LE+ ++RD + + Q YA GVPQ  L V G +E  GT VRF P  E F TN  +
Sbjct: 126 VNALSEWLEVRVKRDGQRYGQRYARGVPQEDLRVLGASEGHGTTVRFKPDEEIFETN--Q 183

Query: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241
           F YE L KR  ELS+LN G+ I   D+R G+   F  EGGI+ FV+ LN  +T IHP I 
Sbjct: 184 FSYETLRKRFEELSYLNRGLEIEFIDERSGESHTFFAEGGIRQFVKDLNSGETGIHP-IV 242

Query: 242 YFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEG 301
               + DG+ V+ ALQ+N G++EN+  F NNI  ++GGTHLAGF+ A+TR +N Y+  + 
Sbjct: 243 AGEGKTDGVVVDFALQYNAGYKENVLTFANNIRTKEGGTHLAGFKTALTRAINGYVKGQA 302

Query: 302 -YSKKAKVSA-TGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLNE 359
             +KK K +A +GDD REGL AVVSVK+P P+F  QTK KL +SE+   V   + + LN 
Sbjct: 303 DLTKKMKGTALSGDDVREGLTAVVSVKLPQPQFEGQTKTKLGNSEIAGIVAGIVYDRLNV 362

Query: 360 YLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSE 419
           +  ENP D ++++ K +DAARAR+AARRA+E+ RRKGAL    LPGKLADCQ +DPA SE
Sbjct: 363 HFEENPKDVRLIIDKAVDAARARDAARRAKELVRRKGALSDNALPGKLADCQSKDPALSE 422

Query: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIG 479
           L++VEGDSAGGSAKQGR+   QAILPL+GKILN E+ RFDKMLA++EV  LITA+G GIG
Sbjct: 423 LFIVEGDSAGGSAKQGRDPSTQAILPLRGKILNTERTRFDKMLANKEVKALITAMGAGIG 482

Query: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539
            D+ + DKLRYH I+IMTDADVDG+HIRTLLLTFF+RQ  +++E G++YIAQPPLY+   
Sbjct: 483 EDDTDYDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQYQKLIESGYLYIAQPPLYRAHN 542

Query: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNANAPALAGEPLEKLVAEYNATQKMIGRMER 599
            + E++IKDD  ++ + ++   +   + T     +  G  + +L+         I  +E 
Sbjct: 543 SRMERFIKDDAELNNFLLTRVSEDVEVRTPGGC-SFKGTDIVRLMRSIETVAARIRDVET 601

Query: 600 R--FPKALLKELVYQPTLAEADLSNEQAVTRWINTLVSELNEKEQHGSQ----WKF--DI 651
                +  L  L Y           E+    W           EQH       W      
Sbjct: 602 AGISRELFLGFLEY----------GERITPEWF----------EQHDGNGLRPWLAGRGY 641

Query: 652 RENAELQQFEP-----IVRVRTHGVDTDYPLDHEFITGPEYRRICALGETLRGLIEDDAF 706
              AEL+  +      +V   T+G  T   +  EF     YR      E +R      +F
Sbjct: 642 SMTAELESGDEGDRTFVVFENTNGHRT--RIGAEFFGSRMYRSSWDALEAIRSECGGLSF 699

Query: 707 -IERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPDSRRMLRV 765
            ++R                + +E+RRGL+IQRYKGLGEMNP+QLW TTM+P++R +L+V
Sbjct: 700 TLDRKGETVGEGDMFDLQRMVFEEARRGLNIQRYKGLGEMNPEQLWVTTMNPENRTLLQV 759

Query: 766 TVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI 804
           +++DA  A   F  LMGD VEPRR FI  NAL    +DI
Sbjct: 760 SIEDAEEASDAFEQLMGDRVEPRREFIVRNALAVQELDI 798