Pairwise Alignments

Query, 310 a.a., ABC-type multidrug transport system, ATPase component from Sphingomonas koreensis DSMZ 15582

Subject, 580 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (494), Expect = 3e-54
 Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 7   ISVEGLTKRFGNRTVVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDGGGGEVL 66
           I   GLTKRFG+ T  D ++  + RG+I G LGPNG+GK+TT +M+CGLL P  G G V 
Sbjct: 333 IEAHGLTKRFGDFTAADDITFAIPRGQIFGLLGPNGAGKSTTFKMLCGLLKPTAGEGRVS 392

Query: 67  GMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGL--DEKMKRVDAALERLG 124
           G DL  +    + ++GYM Q+F L+ DL++ +NL F A  YGL    K +R+    E   
Sbjct: 393 GYDLRRESAQARNQLGYMAQKFSLYGDLSVAQNLEFFAGVYGLAGAHKTERIALLGEVFD 452

Query: 125 LETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQVHMLSAE 184
                   A  L  G KQRLALA  V+H+P  L LDEPT+GVDP+ RREFW  ++ L  +
Sbjct: 453 FGPYGAMSAKDLPLGIKQRLALACAVIHEPAALFLDEPTSGVDPITRREFWTHINALVEK 512

Query: 185 GTTVLVSTHYMDEAERCHDIAYIAYGVLLARGT 217
           G TVLV+TH+MDEAE C  IA I +G  +A G+
Sbjct: 513 GITVLVTTHFMDEAEYCDRIALIYHGRSIALGS 545



 Score =  187 bits (475), Expect = 5e-52
 Identities = 118/304 (38%), Positives = 168/304 (55%), Gaps = 10/304 (3%)

Query: 7   ISVEGLTKRFGNRT-VVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDGGGGEV 65
           I +  ++KRFG+    +D +S  VG G I G +GP+G+GKTT LR++ GL++PD G  EV
Sbjct: 6   IRLSDVSKRFGSAAPALDHLSGRVGGGEITGLVGPDGAGKTTLLRLMTGLMVPDSGSIEV 65

Query: 66  LGMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGLD--EKMKRVDAALERL 123
           LG D   +   ++ +IGYM QRFGL+EDL+++ENL   AD  GL   ++       L   
Sbjct: 66  LGFDTRREPAGLQAQIGYMPQRFGLYEDLSVQENLDLYADMRGLALVDRPAAFAELLRFT 125

Query: 124 GLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQVHMLSA 183
            L    G+LAG LSGG KQ+L LA  +L  P +LLLDEP  GVDP++RR+ W  V  L+ 
Sbjct: 126 DLARFTGRLAGKLSGGMKQKLGLACALLKKPRLLLLDEPGVGVDPISRRDLWAMVRDLTK 185

Query: 184 EGTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEI--VVQSGLVALAG----EGPGA 237
           +GT V+ ST Y++EAE C  +  +  G LL  G   ++   V   +  + G      P  
Sbjct: 186 DGTGVVWSTAYLEEAEACDRVLLLNGGKLLFAGPPADMRERVTGRVFKITGISGRRRPIL 245

Query: 238 DRLAPKLERAPGVAMAAAFGPTVHVCGRDMAALRAAVADIAPG-ISWRETEPTLEDVFIH 296
            RL  + E   GV    A    V    R  A +  A+A +  G +S + T P  ED F+ 
Sbjct: 246 ARLLERSEVMDGVIQGEAMRIVVGPGDRPAALIDRAIAGLDAGALSAKPTSPRFEDAFVD 305

Query: 297 LMRG 300
           ++ G
Sbjct: 306 MLGG 309