Pairwise Alignments

Query, 310 a.a., ABC-type multidrug transport system, ATPase component from Sphingomonas koreensis DSMZ 15582

Subject, 1171 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  207 bits (526), Expect = 1e-57
 Identities = 110/228 (48%), Positives = 148/228 (64%), Gaps = 2/228 (0%)

Query: 1   VTGDAAISVEGLTKRFGNRTVVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDG 60
           V G A + V GL +RFG    V  VS +V +G + G LGPNG+GK+TT RM+CGLL P  
Sbjct: 431 VPGPALVEVRGLERRFGAFRAVHDVSFDVRQGEVFGLLGPNGAGKSTTFRMLCGLLPPTA 490

Query: 61  GGGEVLGMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGLD--EKMKRVDA 118
           G   V G+DL T     +R++GY+ QRF  +  L++RENL F A AYGL    + +R+  
Sbjct: 491 GTLRVGGVDLRTAAAEARRQVGYVAQRFSQYGGLSVRENLDFYAGAYGLRGARRNERILW 550

Query: 119 ALERLGLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQV 178
           ALE +GL       AGTL  G +QRLALA  +LH+P IL LDE T+GVDPLARR FW ++
Sbjct: 551 ALEEMGLAPWRDTAAGTLPLGHRQRLALACALLHEPRILFLDEVTSGVDPLARRAFWRRI 610

Query: 179 HMLSAEGTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEIVVQSG 226
             L+ +G T++V+TH+++EAE C  +A +A G LLA GT D++    G
Sbjct: 611 TGLARDGVTIIVTTHFLEEAEYCDRLAVLAGGELLALGTPDDVRALGG 658



 Score =  187 bits (476), Expect = 8e-52
 Identities = 120/269 (44%), Positives = 157/269 (58%), Gaps = 13/269 (4%)

Query: 5   AAISVEGLTKRFGNRTV----VDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDG 60
           AA+   GL + FG+       +D V++ + RG + G +GP+G+GKTT LR+  GLL+PD 
Sbjct: 25  AALLCRGLVRGFGSGKARVRALDGVTVSLARGTVTGLVGPDGAGKTTLLRIAAGLLVPDE 84

Query: 61  GGGEVLGMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGLD-EKMKRVDAA 119
           G   VLG D +     I+ RIGYM QRFGL+EDLT+ ENL   AD  G+  E  KR    
Sbjct: 85  GEMTVLGHDAVRDPLAIQSRIGYMPQRFGLYEDLTVAENLTLYADLQGVTYEARKRRWPH 144

Query: 120 LERL-GLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQV 178
           L RL GL     +LAG LSGG KQ+L LA  ++  P++LLLDEPT GVDPL+RRE W+ V
Sbjct: 145 LMRLTGLAPFMDRLAGRLSGGMKQKLGLACTLVKSPDMLLLDEPTVGVDPLSRRELWNIV 204

Query: 179 H-MLSAEGTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEIVVQSGLV----ALAGE 233
           H ++  +G TVLVST Y+DEAE C  +  +A G +L  G A       GL     A+A +
Sbjct: 205 HGLVREDGITVLVSTAYLDEAEMCDRVLVLAGGRVL--GDAQPADYLKGLAGCAFAVAPD 262

Query: 234 GPGADRLAPKLERAPGVAMAAAFGPTVHV 262
           G     +   L   PGV  A      VH+
Sbjct: 263 GRPPREVQHGLYGVPGVLDATVRDGRVHL 291