Pairwise Alignments

Query, 548 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

Subject, 417 a.a., MFS transporter from Burkholderia phytofirmans PsJN

 Score =  121 bits (304), Expect = 5e-32
 Identities = 108/359 (30%), Positives = 160/359 (44%), Gaps = 12/359 (3%)

Query: 39  MIGLGASPQMIALVQASTTLPIMLLSLWAGAVADNLDRRRVMLAAQSFMLIVSAALAALT 98
           +  LGA  +   L+Q + TLP +LLS+  G  AD   RR +M  A+S   I    +  L 
Sbjct: 43  VFALGADARDTGLLQTAQTLPFLLLSIPLGVWADRRSRRTLMTLAESVRAIAMLCVLLLV 102

Query: 99  WAGLITPWSLLIFTFLIGCGTAINGPAWQASVGDMVPRPMLPDAVAFNSMGFNIARSAGP 158
               ++   L    F+   GT     A  + V  +VPR     A     +  ++A SAGP
Sbjct: 103 LTHTLSLPLLAALGFIAATGTVAYNVAAPSLVPALVPREAYASANGRLELARSVAYSAGP 162

Query: 159 ALGGAIVAVAGAAAAFLVNALSYIGLIAVLFRWKPDLPPRRLPRERLGVAMAAGIRYVRL 218
           ALGG +V   GA  A+   A +   L   L     + P   LP+    + +  G R+V  
Sbjct: 163 ALGGLLVGWIGAGWAYGC-AAALSALAVALLAGLREPPRTALPQRHFMLELRDGTRFVLR 221

Query: 219 SPNIRVVLARAALFGFGASALPALMPLIARDLVGGGALTYGLLLGGFGAGAVLGAIGSRR 278
              +R +LA A  F  G   L A+    A   +G  A   G+ LG +G G V GA+ +  
Sbjct: 222 DALLRPMLATAVFFNLGFFVLQAVYVPYAVHRLGLSASAVGVTLGAYGVGMVCGALAAPA 281

Query: 279 LRTRLS-TEALVRLATVMLAAGAGLIA--LDPGLVLTLLALVLGGAG---WVSALSTFNV 332
           +  RL+    L+   +  L A   ++A  + P   L +L+  L GAG   WV   +T   
Sbjct: 282 IARRLAFGRVLIIGPSCGLLASLVMVATLVTPSFWLAMLSFFLLGAGPILWVVGSTTLR- 340

Query: 333 SVQMASPRWVVARALALYQMAAFGGMAGGSWAFGTIVEAR-GLPAALIAAAMVLLVSIL 390
             Q  +P  ++ R  AL   A +G    G+   G  + AR G+ A L+AAA+  LV  L
Sbjct: 341 --QAITPERMMGRVSALNSTATYGARPLGA-LLGAAISARWGMDACLVAAAVAFLVQAL 396



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 14/177 (7%)

Query: 13  LFRSVWMASLFSNFGGLI-QSVGASWMMIGLGASPQMIALVQASTTLPIMLLSLWAGAVA 71
           L R +   ++F N G  + Q+V   + +  LG S   + +   +  + ++  +L A A+A
Sbjct: 224 LLRPMLATAVFFNLGFFVLQAVYVPYAVHRLGLSASAVGVTLGAYGVGMVCGALAAPAIA 283

Query: 72  DNLDRRRVMLAAQSFMLIVSAALAALTWAGLITP--WSLLIFTFLIGCGTAINGPAWQAS 129
             L   RV++   S  L+ S  + A     L+TP  W  ++  FL+G G  +        
Sbjct: 284 RRLAFGRVLIIGPSCGLLASLVMVAT----LVTPSFWLAMLSFFLLGAGPILWVVGSTTL 339

Query: 130 VGDMVPRPMLPDAVAFNSMGFNIARSAGPALGGAIVA-------VAGAAAAFLVNAL 179
              + P  M+    A NS     AR  G  LG AI A       +  AA AFLV AL
Sbjct: 340 RQAITPERMMGRVSALNSTATYGARPLGALLGAAISARWGMDACLVAAAVAFLVQAL 396