Pairwise Alignments

Query, 548 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

Subject, 420 a.a., MFS transporter from Burkholderia phytofirmans PsJN

 Score =  127 bits (320), Expect = 6e-34
 Identities = 111/395 (28%), Positives = 177/395 (44%), Gaps = 34/395 (8%)

Query: 12  PLFRSVWMASLFSNFGGLIQSVGASWMMIGLGASPQMIALVQASTTLPIMLLSLWAGAVA 71
           P F+  W   + S+    + +V   W +  L  S   + LV  +  LP+ +L+L  G VA
Sbjct: 20  PAFQRFWCTRILSSLSFQMLAVAMGWHIYALTHSAFALGLVGLAQFLPMFVLTLVVGHVA 79

Query: 72  DNLDRRRVMLAAQSFMLIVSAALAALTWAGLITPWSLLIFTFLIGCGTAINGPAWQASVG 131
           D  DRRR+    QS   + +   A  T++G I+   + +    +G   A   PA  + + 
Sbjct: 80  DRYDRRRIAAICQSLESVAALLFAVGTFSGWISAPVIYVLAACVGAARAFESPAVASLLS 139

Query: 132 DMVPRPMLPDAVAFNSMGFNIARSAGPALGGAIVAVAGAAAAFLVNALSYIGLIAVLFRW 191
            +VPR  LP A A+ +     A+ AGPALGG +  + G  AA+L   LS+    A +   
Sbjct: 140 GVVPRGQLPKATAWATSANQTAQIAGPALGGLLYGI-GPGAAYLACTLSFAAAAAAV--- 195

Query: 192 KPDLPPRRLPRERLGVAMA---AGIRYVRLSPNIRVVLAR---AALFGFGASALPALMPL 245
              +  +  P  R  V +    +GI ++R  P I   L+    A LFG GA+   AL+P+
Sbjct: 196 -SGISLQTKPANRAPVTLESVFSGIAFIRREPVILGALSLDLFAVLFG-GAT---ALLPI 250

Query: 246 IARDLVGGGALTYGLLLGGFGAGAVLGAIGSRRLRTRLSTEALVRLATVMLAAGAGLIAL 305
            ARD++  G L  GLL  G   GA+ G +       R    A +    V   A   +  L
Sbjct: 251 FARDILHTGPLGLGLLRSGTAIGALAGTVWLAHFPLRNRPGAAMFGGVVAFGAATVVFGL 310

Query: 306 DPGLVLTLLAL-VLGGAGWVSALSTFNVSVQMASPRWVVARALAL--------YQMAAF- 355
               + +L+AL VLG +  +S +   ++ VQ+ +P  ++ R  A+         Q+  F 
Sbjct: 311 SHQFLASLIALMVLGASDTISVVVRLSL-VQLRTPDEMLGRVSAVNSLFIGTSNQLGEFE 369

Query: 356 GGMAGGSWAFGTIVEARGLPAALIAAAMVLLVSIL 390
            G+  G W           PA L+     + V++L
Sbjct: 370 SGLTAGWWG--------AQPAVLVGGVATIAVALL 396