Pairwise Alignments

Query, 309 a.a., rarD protein from Sphingomonas koreensis DSMZ 15582

Subject, 308 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (498), Expect = 6e-55
 Identities = 104/284 (36%), Positives = 164/284 (57%), Gaps = 2/284 (0%)

Query: 8   PAPERLDRTGLIQGLGAYGIWGVLPLFYWLLAGTDVGEVVAMRVLWSVAFLAAVIVALRR 67
           P+  ++   G    + ++ +WG+LPL+Y  L G D+ E++A+R+L SV F+  V + L +
Sbjct: 2   PSHTQVSAKGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLGK 61

Query: 68  GPAILQVLRTPRTMLYL-ATSSLLISTNWLVYIWAIQNHHVLESSLGYFLNPLVNVLIGV 126
               L +LRT    + L A +SL++  +W  + WA+ +  VL +SLG+F+NPL  + +GV
Sbjct: 62  PLPSLALLRTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLGV 121

Query: 127 VLLREKLNAAQIVAVALAAVGVSVLAVGAGGGIWISLTLAFTFGFYGLVRKVAPVGALEG 186
           + L+++L  AQ  AV L  +G+  + +      W++L +   F  YGL +K     +L  
Sbjct: 122 LFLKDRLTVAQKWAVLLGTLGIGYMVMAYAQLPWLALLMGSFFALYGLCKKFIRFDSLTS 181

Query: 187 LTLETLILAPVALGYLFWLGG-GQGLTFGTGWAPTLLMIASGVVTAVPLLLFAAAARRLP 245
           +T+E  +L P+A GYLFWL   GQ     +G    LL + S  VT +PL+ FA A R   
Sbjct: 182 VTIEAALLTPIAAGYLFWLSATGQSEALSSGTGTMLLYMGSAPVTLLPLIFFALAIRHTS 241

Query: 246 YSTLGLLQYLAPTIGFILAITFFGETMTAAHMICFAFIWTGLII 289
            S +GLLQY+ PT+ F+LAI  F ET  +   + FA IW GL++
Sbjct: 242 LSMVGLLQYIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLL 285