Pairwise Alignments

Query, 309 a.a., rarD protein from Sphingomonas koreensis DSMZ 15582

Subject, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  233 bits (594), Expect = 4e-66
 Identities = 121/282 (42%), Positives = 174/282 (61%), Gaps = 1/282 (0%)

Query: 10  PERLDRTGLIQGLGAYGIWGVLPLFYWLLAGTDVGEVVAMRVLWSVAFLAAVIVALRRGP 69
           P+   R G++  + AY +WG  PL++ LL      E++  RV+WS  F+  +++ +    
Sbjct: 2   PDTEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFG 61

Query: 70  AILQVLRTPRTMLYLATSSLLISTNWLVYIWAIQNHHVLESSLGYFLNPLVNVLIGVVLL 129
            + Q+ + P+ ++ L  +SLLI+ NWL++IWA+ N H+L++SLGYF+NPL+NVL+G++ L
Sbjct: 62  KLRQLFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFL 121

Query: 130 REKLNAAQIVAVALAAVGVSVLAVGAGGGIWISLTLAFTFGFYGLVRKVAPVGALEGLTL 189
            E+L   Q  AVALA+ GV +  +  G    +SL LA TFG Y L+RK   V A  GL +
Sbjct: 122 GERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLV 181

Query: 190 ETLILAPVALGYLF-WLGGGQGLTFGTGWAPTLLMIASGVVTAVPLLLFAAAARRLPYST 248
           ET IL PVAL YL   L           W   LL++A+G+VT +PLL FA AA R+P S 
Sbjct: 182 ETAILLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSM 241

Query: 249 LGLLQYLAPTIGFILAITFFGETMTAAHMICFAFIWTGLIIF 290
           LG  QY+ P+I FILA+T F E   A   I F FIW+ L++F
Sbjct: 242 LGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVF 283