Pairwise Alignments

Query, 339 a.a., Topoisomerase IB from Sphingomonas koreensis DSMZ 15582

Subject, 314 a.a., Topoisomerase IB from Pseudomonas stutzeri RCH2

 Score =  260 bits (664), Expect = 4e-74
 Identities = 138/315 (43%), Positives = 185/315 (58%), Gaps = 17/315 (5%)

Query: 26  YWDTDGHRITNRDEIDRLNAVGLPPAYTDAWYCPHPNGHLQATGIDARGRKQYRYHPEFR 85
           Y+  +G RI +   I R+N + +PPAY D W CP P GHLQATG DARGRKQYRYH  +R
Sbjct: 8   YFGPNGERIRDDAAIQRINKLVIPPAYRDVWICPDPQGHLQATGRDARGRKQYRYHSRWR 67

Query: 86  AAQEAAKYDRCAAFGHLLPGLRARIEADLRKRSLSKERAVAAVVRLLDRGHVRVGNEGYA 145
             ++  KYDR   FG  LP LR ++E  L    LS+E+ +A VV LL+   +R+GN  YA
Sbjct: 68  EIRDGNKYDRMLQFGEALPKLRQKLEKHLAAPELSREKVMALVVTLLESTLIRIGNSRYA 127

Query: 146 KANKSFGATTLRKRHAKLNGTSLKLQYRAKSGKLRTLTLTDTSLRSFVKRCQDLPGQHLF 205
           + N+S+G TTLR RH  ++GTS++  +R KSG    +TL D  L   ++RC +LPGQ LF
Sbjct: 128 RDNRSYGLTTLRTRHVDISGTSIRFHFRGKSGVEHEVTLRDRRLARLMRRCMELPGQQLF 187

Query: 206 GWLDGAGEAHPVTSTDVNDYIRDAMGDDFTAKHFRTWGASVIAFEAL------VDAEAPI 259
            +LD  G+   V+S DVN Y+R+  G DFTAK +RTW  S +A E L       D+ A  
Sbjct: 188 QYLDEDGQRRAVSSNDVNLYLREMTGSDFTAKDYRTWAGSALALERLRKLDSAPDSVAKQ 247

Query: 260 GLNTMLEPVTEALGNTPAIARKSYVHPQLIELAKDRDAQRAFRDALTLPRATRH---LSR 316
            L   ++ V   LGNTPA+ R+ Y+HP +++     D        L  PRA R    LS 
Sbjct: 248 NLVETVKQVASQLGNTPAVCRQCYIHPAILDAFSAGD--------LAKPRAARKRKWLSA 299

Query: 317 AERGLIAFLEHNAMA 331
            E  L+ FL+    A
Sbjct: 300 EEVALLNFLQQQRTA 314