Pairwise Alignments

Query, 300 a.a., Predicted permeases from Sphingomonas koreensis DSMZ 15582

Subject, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (303), Expect = 2e-32
 Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 21/297 (7%)

Query: 5   RIMLGLGLRLLAILMLSTMGALIKLVETHGAHLVEIMLFRQFFAIPFVLAWVMMGPG--L 62
           ++ LG+   + A ++ +    + K + +H      +M+    FA+ F +A V   PG   
Sbjct: 34  QLRLGVACLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFAL-FAIALVARKPGGVR 92

Query: 63  ASLKTRHFGLHVSR-----SAVGLTGMVFNFGSVLLLPLAEATTFGFTVPIFATILGALV 117
           A+ +++   L   R     S +GL  + F       + LAE  +     P+    +  ++
Sbjct: 93  AATRSKRPILQSLRALLLVSEIGLVALAFRH-----MGLAEVQSIFAVYPLLVMAMAIVL 147

Query: 118 LKERTGWHRWGAVLAGFVGVLIVTQPGSGHIPLGGALVGLTAALFVAIVAIQLRQMGRTE 177
           L ER GW RW A   GF+G+LI+ +PG G      AL  L +A   A+  +  R +   +
Sbjct: 148 LGERVGWRRWVATGVGFIGLLIIVRPGVGTFE-PAALYSLASATMYALYTVLTRMVSADD 206

Query: 178 SPATTVFWFSTL-SVPPLLIGYAFVAAPH--DWQTFALLILIGFVGGAAQLALTASLRFA 234
           S  TT  +   + ++   L G A   A    DW   ALL L G    ++   L  +L +A
Sbjct: 207 SAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWGWMALLALFGM---SSHFLLIKALEYA 263

Query: 235 PVSAVVPMDYSSLIWATLYGYLLFGVLPGSWTWVGAPIIIASGLYIVWRERQ-RGLR 290
           P S + P +Y SL+W+ + GYL+F  +P   T++G  +I+ASGLY+++R+R+ +GLR
Sbjct: 264 PASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGAVIVASGLYVLYRDRKVKGLR 320