Pairwise Alignments

Query, 300 a.a., Predicted permeases from Sphingomonas koreensis DSMZ 15582

Subject, 331 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  165 bits (417), Expect = 2e-45
 Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 13/286 (4%)

Query: 4   DRIMLGLGLRLLAILMLSTMGALIKLVETHGAHLVEIMLFRQFFAIPFVLAWVMMGPGLA 63
           D  +  +G  +LA+ + + M  L KL+   G  ++ I+LFR   A+  VL  V +    +
Sbjct: 39  DNPLAAIGFIVLAMALFAIMDTLAKLLSA-GQPILLIVLFRSLGAL-IVLTPVFLRQPAS 96

Query: 64  SLKTRHFGLHVSRSAVGLTGMVFNFGSVLLLPLAEATTFGFTVPIFATILGALVLKERTG 123
             +     L   R  +G T +   F ++  + LA+     F+ P+  T+L  ++LKER G
Sbjct: 97  HRRLIQPRLLALRVVLGTTAVTLFFMAIAKMSLADVAAINFSSPLMVTLLSIVLLKERVG 156

Query: 124 WHRWGAVLAGFVGVLIVTQPGSGHIPLGGALVGLTAALFVAIVAIQLRQMGRTESPATTV 183
             RW A+L GF GVL++ +PG G +    AL  +   L  A++ I LR  G+  + AT+ 
Sbjct: 157 PRRWLALLVGFAGVLVILRPGGGVLSQY-ALFAVGGTLCYAVLMIILRLQGQIMTSATSS 215

Query: 184 FWFSTLSVPPLLIGYAFVAAPHDWQT-----FALLILIGFVGGAAQLALTASLRFAPVSA 238
           FWF+  S  PLL+     A P  W T      A+L+++G VGG A L++T ++R AP S 
Sbjct: 216 FWFTLFS--PLLV---LPAMPAVWVTPDPGDLAMLLILGMVGGLAMLSMTQAMRLAPAST 270

Query: 239 VVPMDYSSLIWATLYGYLLFGVLPGSWTWVGAPIIIASGLYIVWRE 284
           V P DYS LIWA   G+ LFG LP   + +G P+II SGLYI+ RE
Sbjct: 271 VAPFDYSYLIWAVAAGWFLFGDLPSPSSLMGLPLIIGSGLYILHRE 316