Pairwise Alignments

Query, 619 a.a., Predicted ATP-dependent endonuclease of the OLD family from Sphingomonas koreensis DSMZ 15582

Subject, 686 a.a., protein containing RecF/RecN/SMC protein, N-terminal domain from Marinobacter adhaerens HP15

 Score = 56.2 bits (134), Expect = 4e-12
 Identities = 95/462 (20%), Positives = 178/462 (38%), Gaps = 72/462 (15%)

Query: 1   LKIYAVSIENFR--GISSANLVLPDHAVLIGDNNTGKSSVLEAIDLALGPDRLSRRPPVD 58
           +K++ + + NFR  G +   ++L D   LIG N +GK++ LEA+      D   RR  + 
Sbjct: 48  MKLHTMRLSNFRSFGQTPTTILLDDITYLIGRNGSGKTAALEALCRLFAFDPAQRR--IQ 105

Query: 59  EHDFFEGKYLPVAAASAEGGAVPDASGEAPVAEAPKITVEVTIVGLSEEQEARFGGNIEW 118
             DF    ++P+           D   E+   E   +  + T   L+E+++         
Sbjct: 106 RSDF----HVPI-----------DEESESEEREL-WVEADFTFPELTEDED--------- 140

Query: 119 LNVETGDFFTEANPAGVDAANIKAALRVTFIGGYDSDEDDFVGNTFYSRSLTEGDKPEPF 178
            N      F       VD    +   R+    G D + ++   N  Y   + +   P   
Sbjct: 141 -NSTVAPHFGHMRLDEVDGIP-RVRFRLNATMGLDGEIEE---NLVYVLDIDDEGNPLDV 195

Query: 179 S---KKDKQHCGFLFLRSLRTGSRALSLEHGSLLDIILRLKEIRPQMWEGTIGTLAAFDV 235
           S   + +++H    +L + R  +  +S    +LL  ILR   IR   WE    T+     
Sbjct: 196 SQVPRSERRHIKLHYLPARRDPADHISYSANALLGRILR--SIR---WEEERETIKGLTT 250

Query: 236 ASDPAL----GISGVLDSIDKSLKKYVPREWGVKPHLKVSNLTREHLRKVVTAFIATGDG 291
               +L     +    D++  S +     ++   P +       E L + ++   + G  
Sbjct: 251 EISDSLIANPSVKAFSDALQASWETLHKGDFFTDPKITFVASEIEALLRHMSVSFSPGHD 310

Query: 292 DHAAPFYRQGTGTINMLVLAML--------SQIAEDKQN-----------VIFAMEEVET 332
           +    F R   G  ++L L+++          ++E+  +            + A+EE E 
Sbjct: 311 EELVDFSRLSDGQKSLLYLSLVFSSQAIGRKTLSEENASFDPDRLQPPVFTLIAIEEPEN 370

Query: 333 AIPPYAQKRIVHELRKLAA----QSIVTSHSPYVLEEFKLDET--VILSRANDGVLTQAQ 386
           ++ P    RIV  L ++ A    Q+++ +H+P +L     +    + L       +T  Q
Sbjct: 371 SLSPLYLGRIVTALNEMVADEDCQALIATHAPSMLRRVPPENIRYMRLGENRQSRVTHIQ 430

Query: 387 IALPDSVKHKRYRQEFRTRFCEGLLSRRVLIAEGATEASAFP 428
           +       HK  R+  +  F E   SR V++ EG +E    P
Sbjct: 431 LPPKTDDAHKFVREAVQA-FPEVYFSRLVILGEGDSEEIVLP 471